* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/AdapEnetClass.Rcheck’
* using R Under development (unstable) (2022-04-13 r82166)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* checking for file ‘AdapEnetClass/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘AdapEnetClass’ version ‘1.2’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘AdapEnetClass’ can be installed ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [12s/12s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking examples with --run-donttest ... ERROR
Running examples in ‘AdapEnetClass-Ex.R’ failed
The error most likely occurred in:

> ### Name: AEnet.aft
> ### Title: Adaptive elastic net for censored data based on AFT models
> ### Aliases: AEnet.aft
> ### Keywords: Adaptive elastic net AFT models lars
> 
> ### ** Examples
> 
> #For full data typically used for AFT models (using imputeYn (2015) package).
> dat<-data(n=100, p=10, r=0, b1=c(rep(5,5),rep(0,5)), sig=1, Cper=0)
> 
> #This needs to run for generating weights of the observations
> l<-mrbj(cbind(dat$y, dat$delta) ~ dat$x, mcsize=100, trace=FALSE, gehanonly=FALSE)
> 
> #AEnet.aft: adaptive elastic net
> wt<-round(l$enet)
> ft.1<-AEnet.aft(dat$x, dat$y, dat$delta, weight=wt, lambda2=1, maxit=10)
> ## No test: 
> ft.1

Call:
NULL
Error in round(rev(x$R2)[1], 3) : 
  non-numeric argument to mathematical function
Calls: <Anonymous> -> print.lars -> cat -> format
Execution halted
* checking PDF version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* checking for new files in some other directories ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/blackswan/ripley/R/packages/tests-devel/AdapEnetClass.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 1:04.33, 57.11 + 6.76