* using log directory ‘/data/gannet/ripley/R/packages/tests-OpenBLAS/rsolr.Rcheck’
* using R Under development (unstable) (2022-06-27 r82528)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘rsolr/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘rsolr’ version ‘0.0.13’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘rsolr’ can be installed ... [53s/65s] OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [43s/54s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking sizes of PDF files under ‘inst/doc’ ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘rsolr_unit_tests.R’ [14m/90m]
Warning: elapsed-time limit of 1.5 hours reached for sub-process
 [14m/90m] ERROR
Running the tests in ‘tests/rsolr_unit_tests.R’ failed.
Complete output:
  > rsolr:::.test()
  Starting Solr...
  Use options(verbose=TRUE) to diagnose any problems.
  WARNING: An illegal reflective access operation has occurred
  WARNING: Illegal reflective access by org.xnio.nio.NioXnio$2 (file:/data/gannet/ripley/.local/share/R/rsolr/solr-undertow-1.6.0-with-solr-5.5.0/lib/xnio-nio-3.3.4.Final.jar) to constructor sun.nio.ch.EPollSelectorProvider()
  WARNING: Please consider reporting this to the maintainers of org.xnio.nio.NioXnio$2
  WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
  WARNING: All illegal access operations will be denied in a future release
  Solr started at: http://localhost:8983/solr/techproducts
  
  Attaching package: 'BiocGenerics'
  
  The following objects are masked from 'package:stats':
  
      IQR, mad, sd, var, xtabs
  
  The following objects are masked from 'package:base':
  
      Filter, Find, Map, Position, Reduce, anyDuplicated, append,
      as.data.frame, basename, cbind, colnames, dirname, do.call,
      duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
      lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
      pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
      tapply, union, unique, unsplit, which.max, which.min
  
  
  Attaching package: 'rsolr'
  
  The following object is masked from 'package:stats':
  
      ftable
  
  The following object is masked from 'package:base':
  
      grouping
  
  Starting Solr...
  Use options(verbose=TRUE) to diagnose any problems.
  WARNING: An illegal reflective access operation has occurred
  WARNING: Illegal reflective access by org.xnio.nio.NioXnio$2 (file:/data/gannet/ripley/.local/share/R/rsolr/solr-undertow-1.6.0-with-solr-5.5.0/lib/xnio-nio-3.3.4.Final.jar) to constructor sun.nio.ch.EPollSelectorProvider()
  WARNING: Please consider reporting this to the maintainers of org.xnio.nio.NioXnio$2
  WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
  WARNING: All illegal access operations will be denied in a future release
  Solr started at: http://localhost:8983/solr/Cars93
  Starting Solr...
  Use options(verbose=TRUE) to diagnose any problems.
  WARNING: An illegal reflective access operation has occurred
  WARNING: Illegal reflective access by org.xnio.nio.NioXnio$2 (file:/data/gannet/ripley/.local/share/R/rsolr/solr-undertow-1.6.0-with-solr-5.5.0/lib/xnio-nio-3.3.4.Final.jar) to constructor sun.nio.ch.EPollSelectorProvider()
  WARNING: Please consider reporting this to the maintainers of org.xnio.nio.NioXnio$2
  WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
  WARNING: All illegal access operations will be denied in a future release
  
  Timing stopped at: 777.4 20.01 5326
  Error in file() : cannot open the connection
  Calls: <Anonymous> -> <Anonymous> -> <Anonymous> -> portIsOpen -> file
  In addition: Warning message:
  In file() :
    cannot open file '/tmp/RtmpX5ooqN/working_dir/Rtmp0Mjcgv/Rfd61676a3bf952': Too many open files
  Execution halted
  sh: error while loading shared libraries: libtinfo.so.6: cannot open shared object file: Error 24
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking re-building of vignette outputs ... [13s/22s] ERROR
Error(s) in re-building vignettes:
--- re-building ‘intro.Rnw’ using knitr
Quitting from lines 122-123 (intro.Rnw) 
Error: processing vignette 'intro.Rnw' failed with diagnostics:
Failed to retrieve schema.
rsolr requires schema via REST or as XML from admin module.
Error from REST: Error in h(simpleError(msg, call)): error in evaluating the argument 'X' in selecting a method for function 'lapply': Not Found


--- failed re-building ‘intro.Rnw’

SUMMARY: processing the following file failed:
  ‘intro.Rnw’

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 2 ERRORs
See
  ‘/data/gannet/ripley/R/packages/tests-OpenBLAS/rsolr.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 1:34:58, 1032.90 + 35.94