* using log directory ‘/data/gannet/ripley/R/packages/tests-OpenBLAS/mvtnorm.Rcheck’
* using R Under development (unstable) (2026-03-11 r89605)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)
    GNU Fortran (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)
* running under: Fedora Linux 42 (Workstation Edition)
* using session charset: UTF-8
* current time: 2026-03-12 06:01:43 UTC
* using option ‘--no-stop-on-test-error’
* checking for file ‘mvtnorm/DESCRIPTION’ ... OK
* this is package ‘mvtnorm’ version ‘1.3-5’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘mvtnorm’ can be installed ... [17s/39s] OK
* used C compiler: ‘gcc (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’
* used Fortran compiler: ‘GNU Fortran (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [22s/54s] OK
* checking Rd files ... [13s/28s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in shell scripts ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking usage of KIND in Fortran files ... OK
* checking sizes of PDF files under ‘inst/doc’ ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘bugfix-tests.R’ [18s/47s]
  Comparing ‘bugfix-tests.Rout’ to ‘bugfix-tests.Rout.save’ ... OK
  Running ‘dmvnorm-Ex.R’ [8s/17s]
  Running ‘plmvnorm-Ex.R’ [63s/157s]
  Comparing ‘plmvnorm-Ex.Rout’ to ‘plmvnorm-Ex.Rout.save’ ... OK
  Running ‘regtest-TVPACK.R’ [11s/29s]
  Comparing ‘regtest-TVPACK.Rout’ to ‘regtest-TVPACK.Rout.save’ ... OK
  Running ‘regtest-aperm.R’ [24s/50s]
  Running ‘regtest-scores.R’ [48s/100s]
  Comparing ‘regtest-scores.Rout’ to ‘regtest-scores.Rout.save’ ... OK
  Running ‘regtest_mvnorm.R’ [68s/111s]
  Running ‘rmvnorm.R’
  Running ‘slpmvnorm.R’ [21s/39s]
  Running ‘test-getInt.R’
  Running ‘test-noisy-root.R’ [15s/20s]
  Comparing ‘test-noisy-root.Rout’ to ‘test-noisy-root.Rout.save’ ... OK
 [282s/578s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ...
  ‘lmvnorm_src.Rnw’ using ‘UTF-8’... [74s/82s] NOTE
differences from ‘lmvnorm_src.Rout.save’
2024,2027c2024,2027
< Sepal.Length      0.68118    -0.04231       1.2662      0.5129
< Sepal.Width      -0.04231     0.18872      -0.3277     -0.1210
< Petal.Length      1.26618    -0.32772       3.0965      1.2873
< Petal.Width       0.51291    -0.12096       1.2873      0.5773
---
> Sepal.Length      0.68133    -0.04211       1.2664      0.5130
> Sepal.Width      -0.04211     0.18864      -0.3271     -0.1207
> Petal.Length      1.26636    -0.32714       3.0961      1.2872
> Petal.Width       0.51303    -0.12071       1.2872      0.5773
2084,2087c2084,2087
< Sepal.Length      0.70333    -0.02504       1.2597      0.5202
< Sepal.Width      -0.02504     0.19064      -0.3245     -0.1190
< Petal.Length      1.25969    -0.32452       3.1120      1.2973
< Petal.Width       0.52021    -0.11899       1.2973      0.5828
---
> Sepal.Length      0.70567    -0.02523       1.2634      0.5185
> Sepal.Width      -0.02523     0.18729      -0.3175     -0.1148
> Petal.Length      1.26343    -0.31746       3.0960      1.2881
> Petal.Width       0.51849    -0.11484       1.2881      0.5773
2094,2097c2094,2097
< Sepal.Length      0.68118    -0.04231       1.2662      0.5129
< Sepal.Width      -0.04231     0.18872      -0.3277     -0.1210
< Petal.Length      1.26618    -0.32772       3.0965      1.2873
< Petal.Width       0.51291    -0.12096       1.2873      0.5773
---
> Sepal.Length      0.68133    -0.04211       1.2664      0.5130
> Sepal.Width      -0.04211     0.18864      -0.3271     -0.1207
> Petal.Length      1.26636    -0.32714       3.0961      1.2872
> Petal.Width       0.51303    -0.12071       1.2872      0.5773
2112c2112
<        5.760        3.057        3.756        1.198 
---
>        5.762        3.057        3.757        1.199 
2143c2143
< Petal.Width -0.2075 0.2228 0.5242
---
> Petal.Width -0.2075 0.2228 0.5241
2152c2152
< Petal.Width -0.1324 0.1918 0.489
---
> Petal.Width -0.1573 0.2169 0.5021
2155c2155
< [1] 0.03823
---
> [1] 0.0365
 [74s/83s] NOTE
* checking re-building of vignette outputs ... [127s/134s] OK
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 NOTE
See
  ‘/data/gannet/ripley/R/packages/tests-OpenBLAS/mvtnorm.Rcheck/00check.log’
for details.

Time 16:41.76, 563.25 + 18.93