* using log directory ‘/data/gannet/ripley/R/packages/tests-OpenBLAS/iptmnetr.Rcheck’
* using R Under development (unstable) (2021-05-17 r80307)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘iptmnetr/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘iptmnetr’ version ‘0.1.8’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘iptmnetr’ can be installed ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking LazyData ... NOTE
  'LazyData' is specified without a 'data' directory
* checking examples ... ERROR
Running examples in ‘iptmnetr-Ex.R’ failed
The error most likely occurred in:

> ### Name: get_info
> ### Title: Get information.
> ### Aliases: get_info
> 
> ### ** Examples
> 
> info <- get_info("Q15796")
No encoding supplied: defaulting to UTF-8.
Error in get_info("Q15796") : 
  Request failed with code : 500 and error : IO error: failed to lookup address information: Name or service not known
Execution halted
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 ERROR
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > #option(testthat.default_reporter = "summary")
  > test_check("iptmnetr")
  Loading required package: iptmnetr
  ══ Skipped tests ═══════════════════════════════════════════════════════════════
  • On CRAN (2)
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error (test_api.R:8:3): get_info returns valid data ─────────────────────────
  Error: Request failed with code : 500 and error : IO error: failed to lookup address information: Name or service not known
  Backtrace:
      █
   1. └─iptmnetr::get_info("Q15796") test_api.R:8:2
  ── Error (test_api.R:13:3): search returns valid data ──────────────────────────
  Error: Request failed with code : 500 and error : IO error: failed to lookup address information: Name or service not known
  Backtrace:
      █
   1. └─iptmnetr::search_iptmnet("Smad2", TermType()$ALL, Role()$EnzymeOrSubstrate) test_api.R:13:2
  ── Error (test_api.R:20:3): get_substrates returns valid data ──────────────────
  Error: Request failed with code : 500 and error : IO error: failed to lookup address information: Name or service not known
  Backtrace:
      █
   1. └─iptmnetr::get_substrates("Q15796") test_api.R:20:2
  ── Error (test_api.R:27:3): get_proteoforms returns valid data ─────────────────
  Error: Request failed with code : 500 and error : IO error: failed to lookup address information: Name or service not known
  Backtrace:
      █
   1. └─iptmnetr::get_proteoforms("Q15796") test_api.R:27:2
  ── Error (test_api.R:34:3): get_ptmppi returns valid data ──────────────────────
  Error: Request failed with code : 500 and error : IO error: failed to lookup address information: Name or service not known
  Backtrace:
      █
   1. └─iptmnetr::get_ptm_dependent_ppi("Q15796") test_api.R:34:2
  ── Error (test_api.R:40:3): get_variants returns valid data ────────────────────
  Error: Request failed with code : 500 and error : IO error: failed to lookup address information: Name or service not known
  Backtrace:
      █
   1. └─iptmnetr::get_variants("Q15796") test_api.R:40:2
  ── Error (test_api.R:46:3): test get_ppi_for_proteoforms returns valid data ────
  Error: Request failed with code : 500 and error : IO error: failed to lookup address information: Name or service not known
  Backtrace:
      █
   1. └─iptmnetr::get_ppi_for_proteoforms("Q15796") test_api.R:46:2
  ── Error (test_api.R:69:3): get_ptm_enzymes_from_list returns valid data ───────
  Error: Request failed with code : 500 and error : IO error: failed to lookup address information: Name or service not known
  Backtrace:
      █
   1. └─iptmnetr::get_ptm_enzymes_from_list(substrates) test_api.R:69:2
  ── Error (test_api.R:99:3): test get_ptm_ppi_from_list returns valid data ──────
  Error: Request failed with code : 500 and error : IO error: failed to lookup address information: Name or service not known
  Backtrace:
      █
   1. └─iptmnetr::get_ptm_ppi_from_list(substrates) test_api.R:99:2
  
  [ FAIL 9 | WARN 0 | SKIP 2 | PASS 0 ]
  Error: Test failures
  Execution halted
* checking PDF version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 2 ERRORs, 1 NOTE
See
  ‘/data/gannet/ripley/R/packages/tests-OpenBLAS/iptmnetr.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 1:01.40, 26.23 + 4.82