* using log directory ‘/data/localhost/ripley/R/packages/tests-OpenBLAS/EFA.dimensions.Rcheck’ * using R Under development (unstable) (2026-09-14 r90539) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2) GNU Fortran (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2) * running under: Fedora Linux 44 (Server Edition) * using session charset: UTF-8 * current time: 2026-09-15 07:32:56 UTC * using option ‘--no-stop-on-test-error’ * checking for file ‘EFA.dimensions/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘EFA.dimensions’ version ‘0.1.9.1’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘EFA.dimensions’ can be installed ... [12s/26s] OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [21s/32s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [9s/12s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [113s/127s] ERROR Error(s) in re-building vignettes: --- re-building ‘Coefficient_descriptions_vignettes.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘Coefficient_descriptions_vignettes.Rmd’ --- re-building ‘EFA_BIFACTOR_vignettes.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘EFA_BIFACTOR_vignettes.Rmd’ --- re-building ‘EXAMPLES_vignettes.Rmd’ using rmarkdown Quitting from EXAMPLES_vignettes.Rmd:156-167 [unnamed-chunk-10] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `qr.default()`: ! NA/NaN/Inf in foreign function call (arg 1) --- Backtrace: ▆ 1. └─EFA.dimensions::BIFACTOR(...) 2. └─EFA.dimensions:::bifactor_engine(...) 3. ├─lavaan::cfa(...) 4. │ └─base::eval(sc, parent.frame()) 5. │ └─base::eval(sc, parent.frame()) 6. └─lavaan::lavaan(...) 7. └─lavaan:::lav_step16_rotation(...) 8. └─lavaan:::lav_model_vcov(...) 9. ├─base::qr(lavmodel@con.jac[act_idx, , drop = FALSE]) 10. └─base::qr.default(lavmodel@con.jac[act_idx, , drop = FALSE]) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'EXAMPLES_vignettes.Rmd' failed with diagnostics: NA/NaN/Inf in foreign function call (arg 1) --- failed re-building ‘EXAMPLES_vignettes.Rmd’ --- re-building ‘Number_of_factors_tests_vignettes.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘Number_of_factors_tests_vignettes.Rmd’ SUMMARY: processing the following file failed: ‘EXAMPLES_vignettes.Rmd’ Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/data/localhost/ripley/R/packages/tests-OpenBLAS/EFA.dimensions.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 5:06.57, 210.89 + 12.04