* using log directory ‘/data/gannet/ripley/R/packages/tests-OpenBLAS/AnnoProbe.Rcheck’
* using R Under development (unstable) (2026-04-01 r89766)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)
    GNU Fortran (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)
* running under: Fedora Linux 42 (Workstation Edition)
* using session charset: UTF-8
* current time: 2026-04-01 11:28:03 UTC
* using option ‘--no-stop-on-test-error’
* checking for file ‘AnnoProbe/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘AnnoProbe’ version ‘0.1.7’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘AnnoProbe’ can be installed ... [26s/31s] OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [22s/28s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking examples ... [8s/69s] ERROR
Running examples in ‘AnnoProbe-Ex.R’ failed
The error most likely occurred in:

> ### Name: idmap
> ### Title: Get Probe Annotation
> ### Aliases: idmap
> 
> ### ** Examples
> 
> ids=idmap('GPL570',destdir=tempdir())
trying URL 'http://49.235.27.111/GEOmirror/GPL/GPL570_bioc.rda'
Content type 'application/octet-stream' length 264292 bytes (258 KB)
==========================================
downloaded 218 KB

Warning in download.file(paste0(up, down), dt, mode = "wb") :
  downloaded length 224241 != reported length 264292
Warning in download.file(paste0(up, down), dt, mode = "wb") :
  URL 'http://49.235.27.111/GEOmirror/GPL/GPL570_bioc.rda': Timeout of 60 seconds was reached
Error in download.file(paste0(up, down), dt, mode = "wb") : 
  download from 'http://49.235.27.111/GEOmirror/GPL/GPL570_bioc.rda' failed
Calls: idmap -> download.file
Execution halted
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/gannet/ripley/R/packages/tests-OpenBLAS/AnnoProbe.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 4:02.85, 132.21 + 12.85