* using log directory ‘/data/gannet/ripley/R/packages/tests-MKL/tern.rbmi.Rcheck’ * using R Under development (unstable) (2025-11-05 r88988) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2) GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2) * running under: Fedora Linux 42 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘tern.rbmi/DESCRIPTION’ ... OK * this is package ‘tern.rbmi’ version ‘0.1.6’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘tern.rbmi’ can be installed ... [21s/28s] OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [7s/12s] OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... [6s/11s] OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [27s/34s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [9s/14s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ [10s/14s] [10s/15s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [32s/43s] ERROR Error(s) in re-building vignettes: --- re-building ‘tern-rbmi.Rmd’ using rmarkdown Quitting from tern-rbmi.Rmd:163-172 [unnamed-chunk-7] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `fit_mcmc()`: ! unable to load shared object '/tmp/RtmpqSsSGs/working_dir/RtmpmbiMe9/file77c637bcd0695.so': libunwind.so.1: cannot open shared object file: No such file or directory --- Backtrace: ▆ 1. ├─rbmi::draws(...) 2. └─rbmi:::draws.bayes(...) 3. └─rbmi:::fit_mcmc(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tern-rbmi.Rmd' failed with diagnostics: unable to load shared object '/tmp/RtmpqSsSGs/working_dir/RtmpmbiMe9/file77c637bcd0695.so': libunwind.so.1: cannot open shared object file: No such file or directory --- failed re-building ‘tern-rbmi.Rmd’ SUMMARY: processing the following file failed: ‘tern-rbmi.Rmd’ Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/data/gannet/ripley/R/packages/tests-MKL/tern.rbmi.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 5:24.03, 210.87 + 21.79