* using log directory ‘/data/gannet/ripley/R/packages/tests-MKL/snvecR.Rcheck’ * using R Under development (unstable) (2026-03-18 r89646) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7) GNU Fortran (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7) * running under: Fedora Linux 42 (Workstation Edition) * using session charset: UTF-8 * current time: 2026-03-19 23:11:56 UTC * using option ‘--no-stop-on-test-error’ * checking for file ‘snvecR/DESCRIPTION’ ... OK * this is package ‘snvecR’ version ‘3.10.1’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘snvecR’ can be installed ... [6s/16s] OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE Namespace in Imports field not imported from: ‘backports’ All declared Imports should be used. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [7s/16s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ [8s/20s] [9s/22s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [2m/15m] ERROR Error(s) in re-building vignettes: --- re-building ‘analyze_grid_td-ed.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘analyze_grid_td-ed.Rmd’ --- re-building ‘compare_with_c.Rmd’ using rmarkdown Quitting from compare_with_c.Rmd:39-41 [snvec] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! Timeout was reached [www.soest.hawaii.edu]: Operation too slow. Less than 1 bytes/sec transferred the last 600 seconds --- Backtrace: ▆ 1. ├─snvecR::snvec(-1e+05, 1, 1, astronomical_solution = "full-ZB18a") 2. │ └─snvecR::get_solution(...) 3. │ └─snvecR:::get_ZB(astronomical_solution, quiet = quiet, force = force) 4. │ └─readr::read_table(...) 5. │ └─readr:::read_delimited(...) 6. │ └─readr:::datasource_connection(file, skip, skip_empty_rows, comment) 7. │ └─readr:::read_connection(path) 8. │ └─readr:::read_connection_(con, tempfile(), chunk_size) 9. ├─base (local) ``(``, "raw", 65536L) 10. └─curl:::raise_libcurl_error(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'compare_with_c.Rmd' failed with diagnostics: Timeout was reached [www.soest.hawaii.edu]: Operation too slow. Less than 1 bytes/sec transferred the last 600 seconds --- failed re-building ‘compare_with_c.Rmd’ SUMMARY: processing the following file failed: ‘compare_with_c.Rmd’ Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [7s/10s] OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 1 NOTE See ‘/data/gannet/ripley/R/packages/tests-MKL/snvecR.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 17:48.27, 165.81 + 13.73