* using log directory ‘/data/localhost/ripley/R/packages/tests-MKL/rcicr.Rcheck’ * using R Under development (unstable) (2026-10-30 r90795) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2) GNU Fortran (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2) * running under: Fedora Linux 44 (Server Edition) * using session charset: UTF-8 * current time: 2026-10-30 07:37:07 UTC * using option ‘--no-stop-on-test-error’ * checking for file ‘rcicr/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘rcicr’ version ‘1.5.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘rcicr’ can be installed ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [12s/13s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ [36s/155s] [36s/155s] ERROR Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(rcicr) > > test_check("rcicr") Using scaling factor constant:0.3 Using scaling factor constant:0.2 Using scaling factor constant:0.2 | | | 0% | |======================================================================| 100% | | | 0% | |======================================================================| 100% | | | 0% | |======================================================================| 100% | | | 0% | |======================================================================| 100% | | | 0% | |======================================================================| 100% | | | 0% | |======================================================================| 100% | | | 0% | |======================================================================| 100% | | | 0% | |========== | 14% | |==================== | 29% | |============================== | 43% | |======================================== | 57% | 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Informational value: z = 13.4008068693451 (ci norm = 32.3506289583554; reference median = 10.2582083075873; MAD = 1.64858883992317; iterations = 50) | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100%Using reference distribution found in rdata file. Informational value: z = 13.4008068693451 (ci norm = 32.3506289583554; reference median = 10.2582083075873; MAD = 1.64858883992317; iterations = 50) Building the reference from the saved noise, please wait... | | | 0%starting worker pid=2589094 on localhost:11268 at 07:38:20.194 starting worker pid=2589095 on localhost:11268 at 07:38:20.265 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Computing reference distribution, please wait... | | | 0% | |========= | 12% | |================== | 25% | |========================== | 38% | |=================================== | 50% | |============================================ | 62% | |==================================================== | 75% | |============================================================= | 88% | |======================================================================| 100% Reference distribution simulated with response_seed = 99. This independent draw has deliberately not been saved. Informational value: z = 130.814246520177 (ci norm = 32.3506289583554; reference median = 1.38830097747368; MAD = 0.236689265921093; iterations = 8) Using reference distribution found in rdata file. Informational value: z = 13.4008068693451 (ci norm = 32.3506289583554; reference median = 10.2582083075873; MAD = 1.64858883992317; iterations = 50) | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |============== | 20% | 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parent environment loaded rcicr and set parent environment | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |=================================== | 50% | |======================================================================| 100% | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100%Building the reference from the saved noise, please wait... | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Computing reference distribution, please wait... | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% Saving simulated reference distribution to rdata file... | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100%Building the reference from the saved noise, please wait... | | | 0%starting worker pid=2591226 on localhost:11268 at 07:38:27.598 starting worker pid=2591225 on localhost:11268 at 07:38:27.638 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Computing reference distribution, please wait... | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% Saving simulated reference distribution to rdata file... The reference distribution has been saved to the .Rdata file for reuse. Informational value: z = -2.3124244294084 (ci norm = 0.32; reference median = 1.50357804391794; MAD = 0.511834258826241; iterations = 3) | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% | | | 0% | |======================================================================| 100% | | | 0% | |======================================================================| 100% | | | 0% | |============== | 20% | 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This independent draw has deliberately not been saved. 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This independent draw has deliberately not been saved. 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Informational value: z = 123.799827804852 (baseimage = first; ci norm = 32; reference median = 1.12780727162136; MAD = 0.249371855161568; iterations = 24) Using reference distribution found in rdata file. Informational value: z = 161.505539260891 (baseimage = second; ci norm = 32; reference median = 1.14665485260764; MAD = 0.191035832508214; iterations = 24) | | | 0% | |====== | 8% | |============ | 17% | |================== | 25% | |======================= | 33% | |============================= | 42% | |=================================== | 50% | |========================================= | 58% | |=============================================== | 67% | |==================================================== | 75% | |========================================================== | 83% | |================================================================ | 92% | |======================================================================| 100% | | | 0% | |== | 3% | |===== | 6% | |======= | 10% | |========= | 13% | |=========== | 16% | |============== | 19% | |================ | 23% | |================== | 26% | |==================== | 29% | |======================= | 32% | |========================= | 35% | |=========================== | 39% | |============================= | 42% | |================================ | 45% | |================================== | 48% | |==================================== | 52% | |====================================== | 55% | |========================================= | 58% | |=========================================== | 61% | |============================================= | 65% | |=============================================== | 68% | |================================================== | 71% | |==================================================== | 74% | |====================================================== | 77% | |======================================================== | 81% | |=========================================================== | 84% | |============================================================= | 87% | |=============================================================== | 90% | |================================================================= | 94% | |==================================================================== | 97% | |======================================================================| 100% The reference distribution has been saved to the .Rdata file for reuse. Informational value: z = 147.614739317843 (baseimage = first; ci norm = 32; reference median = 1.01732073074422; MAD = 0.209888791677803; iterations = 31) | | | 0% | |====== | 9% | |============= | 18% | |=================== | 27% | |========================= | 36% | |================================ | 45% | |====================================== | 55% | |============================================= | 64% | |=================================================== | 73% | |========================================================= | 82% | |================================================================ | 91% | |======================================================================| 100% | | | 0% | |====== | 8% | |============ | 17% | |================== | 25% | |======================= | 33% | |============================= | 42% | |=================================== | 50% | |========================================= | 58% | |=============================================== | 67% | |==================================================== | 75% | |========================================================== | 83% | |================================================================ | 92% | |======================================================================| 100% | | | 0% | |=== | 4% | |====== | 8% | |========= | 12% | |============ | 17% | |=============== | 21% | |================== | 25% | |==================== | 29% | |======================= | 33% | |========================== | 38% | |============================= | 42% | |================================ | 46% | |=================================== | 50% | |====================================== | 54% | |========================================= | 58% | |============================================ | 62% | |=============================================== | 67% | |================================================== | 71% | |==================================================== | 75% | |======================================================= | 79% | |========================================================== | 83% | |============================================================= | 88% | |================================================================ | 92% | |=================================================================== | 96% | |======================================================================| 100% | | | 0% | |====== | 8% | |============ | 17% | |================== | 25% | |======================= | 33% | |============================= | 42% | |=================================== | 50% | |========================================= | 58% | |=============================================== | 67% | |==================================================== | 75% | |========================================================== | 83% | |================================================================ | 92% | |======================================================================| 100% | | | 0% | |=== | 4% | |====== | 8% | |========= | 12% | |============ | 17% | |=============== | 21% | |================== | 25% | |==================== | 29% | |======================= | 33% | |========================== | 38% | |============================= | 42% | |================================ | 46% | |=================================== | 50% | |====================================== | 54% | |========================================= | 58% | |============================================ | 62% | |=============================================== | 67% | |================================================== | 71% | |==================================================== | 75% | |======================================================= | 79% | |========================================================== | 83% | |============================================================= | 88% | |================================================================ | 92% | |=================================================================== | 96% | |======================================================================| 100% The reference distribution has been saved to the .Rdata file for reuse. Informational value: z = 161.505539260891 (baseimage = second; ci norm = 32; reference median = 1.14665485260764; MAD = 0.191035832508214; iterations = 24) | | | 0% | |====== | 9% | |============= | 18% | |=================== | 27% | |========================= | 36% | |================================ | 45% | |====================================== | 55% | |============================================= | 64% | |=================================================== | 73% | |========================================================= | 82% | |================================================================ | 91% | |======================================================================| 100% | | | 0% | |====== | 8% | |============ | 17% | |================== | 25% | |======================= | 33% | |============================= | 42% | |=================================== | 50% | |========================================= | 58% | |=============================================== | 67% | |==================================================== | 75% | |========================================================== | 83% | |================================================================ | 92% | |======================================================================| 100% | | | 0% | |=== | 4% | |====== | 8% | |========= | 12% | |============ | 17% | |=============== | 21% | |================== | 25% | |==================== | 29% | |======================= | 33% | |========================== | 38% | |============================= | 42% | |================================ | 46% | |=================================== | 50% | |====================================== | 54% | |========================================= | 58% | |============================================ | 62% | |=============================================== | 67% | |================================================== | 71% | |==================================================== | 75% | |======================================================= | 79% | |========================================================== | 83% | |============================================================= | 88% | |================================================================ | 92% | |=================================================================== | 96% | |======================================================================| 100% | | | 0% | |====== | 8% | |============ | 17% | |================== | 25% | |======================= | 33% | |============================= | 42% | |=================================== | 50% | |========================================= | 58% | |=============================================== | 67% | |==================================================== | 75% | |========================================================== | 83% | |================================================================ | 92% | |======================================================================| 100% | | | 0% | |=== | 4% | |====== | 8% | |========= | 12% | |============ | 17% | |=============== | 21% | |================== | 25% | |==================== | 29% | |======================= | 33% | |========================== | 38% | |============================= | 42% | |================================ | 46% | |=================================== | 50% | |====================================== | 54% | |========================================= | 58% | |============================================ | 62% | |=============================================== | 67% | |================================================== | 71% | |==================================================== | 75% | |======================================================= | 79% | |========================================================== | 83% | |============================================================= | 88% | |================================================================ | 92% | |=================================================================== | 96% | |======================================================================| 100% Reference distribution simulated with response_seed = 91. This independent draw has deliberately not been saved. Informational value: z = 165.322138149878 (baseimage = second; ci norm = 32; reference median = 1.11329241451282; MAD = 0.186827414229822; iterations = 24) | | | 0% | |====== | 9% | |============= | 18% | |=================== | 27% | |========================= | 36% | |================================ | 45% | |====================================== | 55% | |============================================= | 64% | |=================================================== | 73% | |========================================================= | 82% | |================================================================ | 91% | |======================================================================| 100% | | | 0% | |====== | 8% | |============ | 17% | |================== | 25% | |======================= | 33% | |============================= | 42% | |=================================== | 50% | |========================================= | 58% | |=============================================== | 67% | 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|========================================= | 58% | |============================================ | 62% | |=============================================== | 67% | |================================================== | 71% | |==================================================== | 75% | |======================================================= | 79% | |========================================================== | 83% | |============================================================= | 88% | |================================================================ | 92% | |=================================================================== | 96% | |======================================================================| 100% Building the reference from the saved noise, please wait... | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Computing reference distribution, please wait... | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% Saving simulated reference distribution to rdata file... Building the reference from the saved noise, please wait... | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Computing reference distribution, please wait... | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% Saving simulated reference distribution to rdata file... Building the reference from the saved noise, please wait... | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Computing reference distribution, please wait... | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% Saving simulated reference distribution to rdata file... Saving _problems/test-legacy-rdata-145.R Building the reference from the saved noise, please wait... | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Computing reference distribution, please wait... | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% Saving simulated reference distribution to rdata file... Building the reference from the saved noise, please wait... | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Computing reference distribution, please wait... | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% Saving simulated reference distribution to rdata file... Building the reference from the saved noise, please wait... | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Computing reference distribution, please wait... | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% Saving simulated reference distribution to rdata file... Building the reference from the saved noise, please wait... | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Computing reference distribution, please wait... | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% Saving simulated reference distribution to rdata file... Building the reference from the saved noise, please wait... | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Computing reference distribution, please wait... | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% Saving simulated reference distribution to rdata file... Building the reference from the saved noise, please wait... | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Computing reference distribution, please wait... | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% Saving simulated reference distribution to rdata file... Building the reference from the saved noise, please wait... | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Computing reference distribution, please wait... | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% Saving simulated reference distribution to rdata file... | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100%Using reference distribution found in rdata file. Informational value: z = -4.28136363455925 (ci norm = 3.2; reference median = 10.2582083075873; MAD = 1.64858883992317; iterations = 50) | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100%Using reference distribution found in rdata file. Informational value: z = -4.28136363455925 (ci norm = 3.2; reference median = 10.2582083075873; MAD = 1.64858883992317; iterations = 50) | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | 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|========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |======================================================================| 100% | | | 0% | |======================================================================| 100%Tracing function "generateNoiseImage" in package "namespace:rcicr" | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2604505 on localhost:11268 at 07:38:57.764 starting worker pid=2604506 on localhost:11268 at 07:38:57.775 starting worker pid=2604793 on localhost:11268 at 07:38:58.233 starting worker pid=2604792 on localhost:11268 at 07:38:58.261 | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100%Building the reference from the saved noise, please wait... | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Computing reference distribution, please wait... | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% Saving simulated reference distribution to rdata file... | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100%starting worker pid=2605726 on localhost:11268 at 07:39:01.048 starting worker pid=2605727 on localhost:11268 at 07:39:01.067 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment starting worker pid=2606919 on localhost:11268 at 07:39:03.663 starting worker pid=2606918 on localhost:11268 at 07:39:03.707 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment starting worker pid=2610068 on localhost:11268 at 07:39:06.654 starting worker pid=2610067 on localhost:11268 at 07:39:06.684 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2612486 on localhost:11268 at 07:39:09.346 starting worker pid=2612487 on localhost:11268 at 07:39:09.393 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment This stimulus file carried a reference distribution from before rcicr built references from the saved noise, and rebuilding it from the saved noise gave different values. The InfoVal this returns supersedes any computed from this file before. | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2614081 on localhost:11268 at 07:39:11.709 starting worker pid=2614082 on localhost:11268 at 07:39:11.743 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment starting worker pid=2615132 on localhost:11268 at 07:39:14.043 starting worker pid=2615133 on localhost:11268 at 07:39:14.049 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment starting worker pid=2616187 on localhost:11268 at 07:39:16.932 starting worker pid=2616188 on localhost:11268 at 07:39:16.959 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2616666 on localhost:11268 at 07:39:20.060 starting worker pid=2616667 on localhost:11268 at 07:39:20.094 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment starting worker pid=2617275 on localhost:11268 at 07:39:22.658 starting worker pid=2617274 on localhost:11268 at 07:39:22.735 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2617619 on localhost:11268 at 07:39:25.464 starting worker pid=2617618 on localhost:11268 at 07:39:25.498 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment This stimulus file carried a reference distribution from before rcicr built references from the saved noise, and rebuilding it from the saved noise gave different values. The InfoVal this returns supersedes any computed from this file before. | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2619085 on localhost:11268 at 07:39:28.927 starting worker pid=2619087 on localhost:11268 at 07:39:28.951 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2619737 on localhost:11268 at 07:39:31.532 starting worker pid=2619735 on localhost:11268 at 07:39:31.543 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment This stimulus file carried a reference distribution from before rcicr built references from the saved noise, and rebuilding it from the saved noise gave different values. The InfoVal this returns supersedes any computed from this file before. | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2620375 on localhost:11268 at 07:39:33.975 starting worker pid=2620377 on localhost:11268 at 07:39:34.037 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2621036 on localhost:11268 at 07:39:36.882 starting worker pid=2621035 on localhost:11268 at 07:39:36.888 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | | | 0% | |====== | 9% | |============= | 18% | |=================== | 27% | |========================= | 36% | |================================ | 45% | |====================================== | 55% | |============================================= | 64% | |=================================================== | 73% | |========================================================= | 82% | |================================================================ | 91% | |======================================================================| 100%starting worker pid=2622084 on localhost:11268 at 07:39:39.756 starting worker pid=2622082 on localhost:11268 at 07:39:39.826 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment starting worker pid=2623289 on localhost:11268 at 07:39:42.678 starting worker pid=2623291 on localhost:11268 at 07:39:42.859 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2623725 on localhost:11268 at 07:39:45.811 starting worker pid=2623724 on localhost:11268 at 07:39:45.913 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment starting worker pid=2624284 on localhost:11268 at 07:39:48.360 starting worker pid=2624283 on localhost:11268 at 07:39:48.416 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2625450 on localhost:11268 at 07:39:51.786 starting worker pid=2625451 on localhost:11268 at 07:39:51.823 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment starting worker pid=2626367 on localhost:11268 at 07:39:54.511 starting worker pid=2626366 on localhost:11268 at 07:39:54.553 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2627697 on localhost:11268 at 07:39:57.827 starting worker pid=2627696 on localhost:11268 at 07:39:57.879 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2628887 on localhost:11268 at 07:40:01.706 starting worker pid=2628888 on localhost:11268 at 07:40:01.709 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment starting worker pid=2629983 on localhost:11268 at 07:40:04.994 starting worker pid=2629984 on localhost:11268 at 07:40:05.063 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment This stimulus file carried a reference distribution from before rcicr built references from the saved noise, and rebuilding it from the saved noise gave different values. The InfoVal this returns supersedes any computed from this file before. | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2630876 on localhost:11268 at 07:40:08.017 starting worker pid=2630877 on localhost:11268 at 07:40:08.078 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2631658 on localhost:11268 at 07:40:10.502 starting worker pid=2631659 on localhost:11268 at 07:40:10.537 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2632923 on localhost:11268 at 07:40:12.907 starting worker pid=2632921 on localhost:11268 at 07:40:13.034 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | | | 0% | |====== | 9% | |============= | 18% | |=================== | 27% | |========================= | 36% | |================================ | 45% | |====================================== | 55% | |============================================= | 64% | |=================================================== | 73% | |========================================================= | 82% | |================================================================ | 91% | |======================================================================| 100%starting worker pid=2633586 on localhost:11268 at 07:40:15.426 starting worker pid=2633587 on localhost:11268 at 07:40:15.472 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment starting worker pid=2634656 on localhost:11268 at 07:40:18.061 starting worker pid=2634655 on localhost:11268 at 07:40:18.078 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment Saving _problems/test-reference-from-saved-noise-898.R | | | 0% | |====== | 9% | |============= | 18% | |=================== | 27% | |========================= | 36% | |================================ | 45% | |====================================== | 55% | |============================================= | 64% | |=================================================== | 73% | |========================================================= | 82% | |================================================================ | 91% | |======================================================================| 100%starting worker pid=2635573 on localhost:11268 at 07:40:21.593 starting worker pid=2635574 on localhost:11268 at 07:40:21.599 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2636118 on localhost:11268 at 07:40:24.272 starting worker pid=2636119 on localhost:11268 at 07:40:24.317 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment This stimulus file carried a reference distribution from before rcicr built references from the saved noise, and rebuilding it from the saved noise gave different values. The InfoVal this returns supersedes any computed from this file before. | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2636568 on localhost:11268 at 07:40:26.660 starting worker pid=2636567 on localhost:11268 at 07:40:26.718 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100%starting worker pid=2637065 on localhost:11268 at 07:40:29.162 starting worker pid=2637064 on localhost:11268 at 07:40:29.200 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment This stimulus file carried a reference distribution from before rcicr built references from the saved noise, and rebuilding it from the saved noise gave different values. The InfoVal this returns supersedes any computed from this file before. starting worker pid=2637920 on localhost:11268 at 07:40:31.571 starting worker pid=2637919 on localhost:11268 at 07:40:31.572 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment This stimulus file carried a reference distribution from before rcicr built references from the saved noise, and rebuilding it from the saved noise gave different values. The InfoVal this returns supersedes any computed from this file before. | | | 0% | |====== | 9% | |============= | 18% | |=================== | 27% | |========================= | 36% | |================================ | 45% | |====================================== | 55% | |============================================= | 64% | |=================================================== | 73% | |========================================================= | 82% | |================================================================ | 91% | |======================================================================| 100%starting worker pid=2639404 on localhost:11268 at 07:40:34.092 starting worker pid=2639406 on localhost:11268 at 07:40:34.213 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment starting worker pid=2640555 on localhost:11268 at 07:40:36.890 starting worker pid=2640557 on localhost:11268 at 07:40:36.905 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment This stimulus file carried a reference distribution from before rcicr built references from the saved noise, and rebuilding it from the saved noise gave different values. 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100%starting worker pid=2642341 on localhost:11268 at 07:40:42.016 starting worker pid=2642340 on localhost:11268 at 07:40:42.091 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment starting worker pid=2642978 on localhost:11268 at 07:40:44.477 starting worker pid=2642977 on localhost:11268 at 07:40:44.479 Loading required package: rcicr Loading required package: rcicr loaded rcicr and set parent environment loaded rcicr and set parent environment Saving _problems/test-seedless-reference-110.R | | | 0% | |============== | 20% | |============================ | 40% | |========================================== | 60% | |======================================================== | 80% | |======================================================================| 100% | | | 0% | |==== | 5% | |======= | 11% | |=========== | 16% | |=============== | 21% | |================== | 26% | |====================== | 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|======================================================================| 100% | | | 0% | |======================================================================| 100%Using scaling factor constant:0 Using scaling factor constant:0.21664464080447 [ FAIL 12 | WARN 0 | SKIP 13 | PASS 1291 ] ══ Skipped tests (13) ══════════════════════════════════════════════════════════ • On CRAN (12): 'test-fixed-bugs.R:402:3', 'test-generateCI-paths.R:163:3', 'test-parallel-equivalence.R:13:3', 'test-parallel-progress.R:42:3', 'test-parallel-progress.R:73:3', 'test-participant-ci-equivalence.R:11:3', 'test-participant-ci-equivalence.R:35:3', 'test-recovery.R:25:1', 'test-regression-baseline.R:30:1', 'test-smoke-pipeline.R:2:1', 'test-trial-validation.R:112:3', 'test-zmap-parallel-equivalence.R:12:3' • tools/ is not present (built package) (1): 'test-release-gate-scripts.R:12:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-generateReferenceDistribution2IFC.R:96:3'): an .Rdata file predating noise_type is scored without consulting it ── Expected `after$reference_norms` to be identical to `intact`. Differences: `actual`: 1.15835056595608776 2.02480190888225309 1.50357804391793914 `expected`: 1.15835056595608754 2.02480190888225309 1.50357804391793914 ── Failure ('test-generateReferenceDistribution2IFC.R:287:7'): reference matrix reuse preserves legacy norms, RNG and saved fields exactly ── Expected `actual` to be identical to `expected`. Differences: actual | expected [7] 1.83276165961992987 | 1.83276165961992987 [7] [8] 1.67563713957542926 | 1.67563713957542926 [8] [9] 1.53755237524483013 | 1.53755237524483013 [9] [10] 1.23963207997926395 - 1.23963207997926417 [10] [11] 1.36132087780417455 | 1.36132087780417455 [11] [12] 1.83276165961992987 | 1.83276165961992987 [12] [13] 1.55467822881735751 | 1.55467822881735751 [13] ── Failure ('test-generateReferenceDistribution2IFC.R:300:7'): reference matrix reuse preserves legacy norms, RNG and saved fields exactly ── Expected `saved$reference_norms` to be identical to `expected`. Differences: actual | expected [7] 1.83276165961992987 | 1.83276165961992987 [7] [8] 1.67563713957542926 | 1.67563713957542926 [8] [9] 1.53755237524483013 | 1.53755237524483013 [9] [10] 1.23963207997926395 - 1.23963207997926417 [10] [11] 1.36132087780417455 | 1.36132087780417455 [11] [12] 1.83276165961992987 | 1.83276165961992987 [12] [13] 1.55467822881735751 | 1.55467822881735751 [13] ── Failure ('test-generateReferenceDistribution2IFC.R:287:7'): reference matrix reuse preserves legacy norms, RNG and saved fields exactly ── Expected `actual` to be identical to `expected`. Differences: actual | expected [1] 0.90390228710078735 | 0.90390228710078735 [1] [2] 1.23963207997926417 - 1.23963207997926395 [2] [3] 1.55467822881735751 | 1.55467822881735751 [3] [4] 0.96390718751486815 | 0.96390718751486815 [4] [5] 0.98540664873852335 | 0.98540664873852335 [5] [6] 0.89312413131733526 - 0.89312413131733515 [6] [7] 1.25571320752317717 | 1.25571320752317717 [7] [8] 1.00805455996829840 | 1.00805455996829840 [8] [9] 1.42963056991719917 | 1.42963056991719917 [9] actual | expected [13] 1.23963207997926417 | 1.23963207997926417 [13] [14] 1.58713555383071636 | 1.58713555383071636 [14] [15] 1.36132087780417455 | 1.36132087780417455 [15] [16] 1.23963207997926395 - 1.23963207997926417 [16] [17] 1.37565182535420782 | 1.37565182535420782 [17] [18] 1.26886571599525855 | 1.26886571599525855 [18] [19] 1.40607714023084940 | 1.40607714023084940 [19] [20] 1.57836973895719912 - 1.57836973895719934 [20] [21] 1.81272414545002891 | 1.81272414545002891 [21] [22] 1.36132087780417455 | 1.36132087780417455 [22] ... ... ... and 1 more ... ── Failure ('test-generateReferenceDistribution2IFC.R:300:7'): reference matrix reuse preserves legacy norms, RNG and saved fields exactly ── Expected `saved$reference_norms` to be identical to `expected`. Differences: actual | expected [1] 0.90390228710078735 | 0.90390228710078735 [1] [2] 1.23963207997926417 - 1.23963207997926395 [2] [3] 1.55467822881735751 | 1.55467822881735751 [3] [4] 0.96390718751486815 | 0.96390718751486815 [4] [5] 0.98540664873852335 | 0.98540664873852335 [5] [6] 0.89312413131733526 - 0.89312413131733515 [6] [7] 1.25571320752317717 | 1.25571320752317717 [7] [8] 1.00805455996829840 | 1.00805455996829840 [8] [9] 1.42963056991719917 | 1.42963056991719917 [9] actual | expected [13] 1.23963207997926417 | 1.23963207997926417 [13] [14] 1.58713555383071636 | 1.58713555383071636 [14] [15] 1.36132087780417455 | 1.36132087780417455 [15] [16] 1.23963207997926395 - 1.23963207997926417 [16] [17] 1.37565182535420782 | 1.37565182535420782 [17] [18] 1.26886571599525855 | 1.26886571599525855 [18] [19] 1.40607714023084940 | 1.40607714023084940 [19] [20] 1.57836973895719912 - 1.57836973895719934 [20] [21] 1.81272414545002891 | 1.81272414545002891 [21] [22] 1.36132087780417455 | 1.36132087780417455 [22] ... ... ... and 1 more ... ── Failure ('test-generateReferenceDistribution2IFC.R:287:7'): reference matrix reuse preserves legacy norms, RNG and saved fields exactly ── Expected `actual` to be identical to `expected`. Differences: actual | expected [6] 0.84466278582632448 | 0.84466278582632448 [6] [7] 0.96528670346006862 | 0.96528670346006862 [7] [8] 0.92968276169201369 | 0.92968276169201369 [8] [9] 0.87520661900377450 - 0.87520661900377461 [9] [10] 0.85575368130492357 | 0.85575368130492357 [10] [11] 0.89983951681539298 | 0.89983951681539298 [11] [12] 0.82082485776470848 | 0.82082485776470848 [12] actual | expected [17] 0.85520085688801384 | 0.85520085688801384 [17] [18] 0.85575368130492357 | 0.85575368130492357 [18] [19] 0.96615798834763422 | 0.96615798834763422 [19] [20] 0.87012451548671865 - 0.87012451548671854 [20] [21] 0.88180829429903240 | 0.88180829429903240 [21] [22] 0.87520661900377450 - 0.87520661900377461 [22] [23] 0.92547174285817091 - 0.92547174285817102 [23] [24] 0.94166095449857468 - 0.94166095449857479 [24] ── Failure ('test-generateReferenceDistribution2IFC.R:300:7'): reference matrix reuse preserves legacy norms, RNG and saved fields exactly ── Expected `saved$reference_norms` to be identical to `expected`. Differences: actual | expected [6] 0.84466278582632448 | 0.84466278582632448 [6] [7] 0.96528670346006862 | 0.96528670346006862 [7] [8] 0.92968276169201369 | 0.92968276169201369 [8] [9] 0.87520661900377450 - 0.87520661900377461 [9] [10] 0.85575368130492357 | 0.85575368130492357 [10] [11] 0.89983951681539298 | 0.89983951681539298 [11] [12] 0.82082485776470848 | 0.82082485776470848 [12] actual | expected [17] 0.85520085688801384 | 0.85520085688801384 [17] [18] 0.85575368130492357 | 0.85575368130492357 [18] [19] 0.96615798834763422 | 0.96615798834763422 [19] [20] 0.87012451548671865 - 0.87012451548671854 [20] [21] 0.88180829429903240 | 0.88180829429903240 [21] [22] 0.87520661900377450 - 0.87520661900377461 [22] [23] 0.92547174285817091 - 0.92547174285817102 [23] [24] 0.94166095449857468 - 0.94166095449857479 [24] ── Failure ('test-generateReferenceDistribution2IFC.R:287:7'): reference matrix reuse preserves legacy norms, RNG and saved fields exactly ── Expected `actual` to be identical to `expected`. Differences: actual | expected [1] 0.90058686506185215 | 0.90058686506185215 [1] [2] 0.87520661900377450 - 0.87520661900377461 [2] [3] 0.84466278582632448 | 0.84466278582632448 [3] [4] 0.88024637124337646 | 0.88024637124337646 [4] [5] 1.08821505434042431 | 1.08821505434042431 [5] actual | expected [11] 0.92968276169201369 | 0.92968276169201369 [11] [12] 0.96528670346006862 | 0.96528670346006862 [12] [13] 0.87520661900377450 | 0.87520661900377450 [13] [14] 0.86642268852084681 - 0.86642268852084692 [14] [15] 0.83826101694248445 | 0.83826101694248445 [15] [16] 0.87520661900377461 - 0.87520661900377450 [16] [17] 0.85105959023563194 | 0.85105959023563194 [17] [18] 0.92547174285817102 | 0.92547174285817102 [18] [19] 0.92968276169201369 | 0.92968276169201369 [19] ── Failure ('test-generateReferenceDistribution2IFC.R:300:7'): reference matrix reuse preserves legacy norms, RNG and saved fields exactly ── Expected `saved$reference_norms` to be identical to `expected`. Differences: actual | expected [1] 0.90058686506185215 | 0.90058686506185215 [1] [2] 0.87520661900377450 - 0.87520661900377461 [2] [3] 0.84466278582632448 | 0.84466278582632448 [3] [4] 0.88024637124337646 | 0.88024637124337646 [4] [5] 1.08821505434042431 | 1.08821505434042431 [5] actual | expected [11] 0.92968276169201369 | 0.92968276169201369 [11] [12] 0.96528670346006862 | 0.96528670346006862 [12] [13] 0.87520661900377450 | 0.87520661900377450 [13] [14] 0.86642268852084681 - 0.86642268852084692 [14] [15] 0.83826101694248445 | 0.83826101694248445 [15] [16] 0.87520661900377461 - 0.87520661900377450 [16] [17] 0.85105959023563194 | 0.85105959023563194 [17] [18] 0.92547174285817102 | 0.92547174285817102 [18] [19] 0.92968276169201369 | 0.92968276169201369 [19] ── Failure ('test-legacy-rdata.R:145:3'): a file without nscales is scored from its saved basis, whatever nscales says ── Expected `fallback$norms` to be identical to `explicit_5$norms`. Differences: `actual`: 0.70652642434333590 0.69499776102720456 0.70570206405395641 `expected`: 0.70652642434333601 0.69499776102720456 0.70570206405395630 ── Failure ('test-reference-from-saved-noise.R:898:3'): an independent-base cache is refreshed on the same terms ── Expected `after$reference_norms_by_base[["second"]]$norms` to be identical to `genuine`. Differences: actual | expected [5] 1.16486422495063335 | 1.16486422495063335 [5] [6] 0.92291422968589776 | 0.92291422968589776 [6] [7] 1.01781978562933939 | 1.01781978562933939 [7] [8] 1.27552359314075714 - 1.27552359314075692 [8] [9] 0.49663970670885438 | 0.49663970670885438 [9] [10] 1.12818508434927223 | 1.12818508434927223 [10] [11] 0.91409409979844369 | 0.91409409979844369 [11] actual | expected [13] 1.26176801227843005 | 1.26176801227843005 [13] [14] 0.91360863731039443 | 0.91360863731039443 [14] [15] 1.12844548026465574 | 1.12844548026465574 [15] [16] 1.52445175439851810 - 1.52445175439851832 [16] [17] 1.26982709350253042 | 1.26982709350253042 [17] [18] 0.81968536010498139 | 0.81968536010498139 [18] [19] 1.19922790503390697 | 1.19922790503390697 [19] ── Failure ('test-seedless-reference.R:110:3'): a read-only seedless file is scored reproducibly with response_seed, unwritten ── Expected `a` to be identical to `b`. Differences: `actual`: 62.502882847115842 `expected`: 62.502882847115885 [ FAIL 12 | WARN 0 | SKIP 13 | PASS 1291 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [16s/18s] OK * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/data/localhost/ripley/R/packages/tests-MKL/rcicr.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 4:10.14, 110.12 + 12.49