* using log directory ‘/data/gannet/ripley/R/packages/tests-MKL/missPLS.Rcheck’
* using R Under development (unstable) (2026-04-20 r89922)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)
    GNU Fortran (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)
* running under: Fedora Linux 42 (Workstation Edition)
* using session charset: UTF-8
* current time: 2026-04-20 20:06:05 UTC
* using option ‘--no-stop-on-test-error’
* checking for file ‘missPLS/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘missPLS’ version ‘0.2.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘missPLS’ can be installed ... [6s/32s] OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/14s] OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [9s/19s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [16s/33s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’ [40s/64s]
 [40s/64s] ERROR
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(missPLS)
  > 
  > test_check("missPLS")
  Saving _problems/test-selection-41.R
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 40 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-selection.R:41:3'): complete-data Q2 uses the documented cv.plsR interface ──
  Expected `via_cv_plsR` to be identical to `via_kfold`.
  Differences:
       actual                   | expected                                
  [40] -177.0261089397084788288 | -177.0261089397084788288 [40]           
  [41] 1.0000000000000000000    | 1.0000000000000000000    [41]           
  [42] 2.3800593866010011368    | 2.3800593866010011368    [42]           
  [43] 3.0000268184592844278    - 3.0000268184592862042    [43]           
  [44] 10.9824641924656205560   - 10.9824641913014673378   [44]           
  [45] 10.0013009397120651300   | 10.0013009397120651300   [45]           
  [46] 8.2795322744444703744    | 8.2795322744444703744    [46]           
  [47] 3.6105650763503445155    | 3.6105650763503445155    [47]           
  [48] 0.1069771188345152585    - 0.1069771188345152724    [48]           
  [49] 0.1076421738760658386    - 0.1076421738729357869    [49]           
   ... ...                        ...                      and 18 more ...
  
  
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 40 ]
  Error:
  ! Test failures.
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [35s/156s] OK
* checking PDF version of manual ... [7s/10s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/gannet/ripley/R/packages/tests-MKL/missPLS.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 8:50.11, 134.04 + 15.18