* using log directory ‘/data/localhost/ripley/R/packages/tests-MKL/mildsvm.Rcheck’
* using R Under development (unstable) (2026-07-18 r90269)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 16.1.1 20260515 (Red Hat 16.1.1-2)
    GNU Fortran (GCC) 16.1.1 20260515 (Red Hat 16.1.1-2)
* running under: Fedora Linux 44 (Server Edition)
* using session charset: UTF-8
* current time: 2026-07-18 23:52:52 UTC
* using option ‘--no-stop-on-test-error’
* checking for file ‘mildsvm/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘mildsvm’ version ‘0.4.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... INFO
Package suggested but not available for checking: ‘gurobi’
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘mildsvm’ can be installed ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [12s/13s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [15s/15s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’ [31s/32s]
 [31s/32s] ERROR
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(mildsvm)
  > 
  > test_check("mildsvm")
  Saving _problems/test-feature_map-8.R
  [ FAIL 1 | WARN 0 | SKIP 89 | PASS 395 ]
  
  ══ Skipped tests (89) ══════════════════════════════════════════════════════════
  • On CRAN (25): 'test-examples.R:2:3', 'test-examples.R:24:3',
    'test-examples.R:67:3', 'test-examples.R:93:3', 'test-examples.R:109:3',
    'test-examples.R:123:3', 'test-examples.R:137:3', 'test-examples.R:152:3',
    'test-examples.R:167:3', 'test-examples.R:213:3', 'test-examples.R:246:3',
    'test-examples.R:273:3', 'test-examples.R:298:3', 'test-examples.R:335:3',
    'test-examples.R:362:3', 'test-examples.R:392:3', 'test-examples.R:409:3',
    'test-feature_map.R:233:1', 'test-mi_df.R:68:1', 'test-mild_df.R:65:1',
    'test-smm.R:360:1', 'test-smm.R:388:1', 'test-svor_exc.R:15:1',
    'test-svor_exc.R:45:3', 'test-svor_exc.R:232:1'
  • {MilDistribution} is not installed (2): 'test-fidelity.R:2:3',
    'test-fidelity.R:32:3'
  • {gurobi} is not installed (62): 'test-cv_misvm.R:3:3',
    'test-cv_misvm.R:31:3', 'test-cv_misvm.R:81:3', 'test-cv_misvm.R:136:3',
    'test-fidelity.R:58:3', 'test-fidelity.R:140:3', 'test-fidelity.R:191:3',
    'test-fidelity.R:248:3', 'test-fidelity.R:287:3', 'test-mior.R:39:3',
    'test-mior.R:73:3', 'test-mior.R:121:3', 'test-mior.R:175:3',
    'test-mior.R:200:3', 'test-mior.R:256:3', 'test-mior.R:276:3',
    'test-mior.R:312:3', 'test-mior.R:335:3', 'test-mismm.R:2:3',
    'test-mismm.R:38:3', 'test-mismm.R:77:3', 'test-mismm.R:98:3',
    'test-mismm.R:153:3', 'test-mismm.R:167:3', 'test-mismm.R:269:3',
    'test-mismm.R:295:3', 'test-mismm.R:332:3', 'test-mismm.R:364:3',
    'test-mismm.R:399:3', 'test-mismm.R:427:3', 'test-misvm.R:32:3',
    'test-misvm.R:89:3', 'test-misvm.R:124:3', 'test-misvm.R:174:3',
    'test-misvm.R:189:3', 'test-misvm.R:264:3', 'test-misvm.R:282:3',
    'test-misvm.R:343:3', 'test-misvm.R:405:3', 'test-misvm.R:432:3',
    'test-misvm.R:487:3', 'test-misvm.R:513:3', 'test-misvm.R:523:3',
    'test-misvm.R:535:3', 'test-misvm.R:565:3', 'test-misvm.R:584:3',
    'test-misvm_orova.R:29:3', 'test-misvm_orova.R:145:3',
    'test-misvm_orova.R:223:3', 'test-misvm_orova.R:240:3',
    'test-misvm_orova.R:262:3', 'test-omisvm.R:3:3', 'test-omisvm.R:44:3',
    'test-omisvm.R:67:3', 'test-omisvm.R:115:3', 'test-omisvm.R:144:3',
    'test-omisvm.R:194:3', 'test-omisvm.R:214:3', 'test-omisvm.R:237:3',
    'test-omisvm.R:257:3', 'test-omisvm.R:285:3', 'test-omisvm.R:299:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-feature_map.R:8:5'): Nystrom method approximates the true kernel on a dataframe. ──
  Expected `mean(abs(true_kernel - approximate_kernel))` < `mean_thresh`.
  Actual comparison: 0.000000000000001 >= 0.000000000000001
  Difference: 0.000000000000000 >= 0
  Backtrace:
      ▆
   1. └─mildsvm (local) check_nystrom_approximation(fit, df, 1e-14, 1e-15) at test-feature_map.R:21:3
   2.   └─testthat::expect_lt(...) at test-feature_map.R:8:5
  
  [ FAIL 1 | WARN 0 | SKIP 89 | PASS 395 ]
  Error:
  ! Test failures.
  Execution halted
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/localhost/ripley/R/packages/tests-MKL/mildsvm.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 1:37.72, 84.26 + 5.38