* using log directory ‘/data/localhost/ripley/R/packages/tests-MKL/janusplot.Rcheck’
* using R Under development (unstable) (2026-11-13 r90888)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 16.2.1 20261029 (Red Hat 16.2.1-3)
    GNU Fortran (GCC) 16.2.1 20261029 (Red Hat 16.2.1-3)
* running under: Fedora Linux 44 (Server Edition)
* using session charset: UTF-8
* current time: 2026-11-14 07:44:46 UTC
* using option ‘--no-stop-on-test-error’
* checking for file ‘janusplot/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘janusplot’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... INFO
Package suggested but not available for checking: 'kernR'
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘janusplot’ can be installed ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [14s/16s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [27s/28s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’ [133s/142s]
 [133s/142s] ERROR
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(janusplot)
  > 
  > test_check("janusplot")
  Saving _problems/test-derivatives-365.R
  Saving _problems/test-fit-object-76.R
  Saving _problems/test-fit-object-79.R
  Saving _problems/test-fit-object-407.R
  [ FAIL 4 | WARN 0 | SKIP 107 | PASS 1058 ]
  
  ══ Skipped tests (107) ═════════════════════════════════════════════════════════
  • On CRAN (83): 'test-axes.R:1:1', 'test-compact.R:1:1',
    'test-compare.R:179:1', 'test-compare.R:263:1', 'test-derivatives.R:11:3',
    'test-derivatives.R:45:3', 'test-derivatives.R:71:3',
    'test-derivatives.R:87:3', 'test-derivatives.R:108:3',
    'test-derivatives.R:120:3', 'test-derivatives.R:128:3',
    'test-derivatives.R:142:3', 'test-derivatives.R:169:3',
    'test-derivatives.R:186:3', 'test-derivatives.R:193:3',
    'test-derivatives.R:201:3', 'test-derivatives.R:209:3',
    'test-derivatives.R:220:3', 'test-derivatives.R:236:3',
    'test-derivatives.R:252:3', 'test-derivatives.R:266:3',
    'test-derivatives.R:278:3', 'test-derivatives.R:295:3',
    'test-derivatives.R:301:3', 'test-derivatives.R:306:3',
    'test-derivatives.R:319:1', 'test-derivatives.R:334:1', 'test-engine.R:1:1',
    'test-focus.R:1:1', 'test-integration.R:1:1', 'test-k-cap.R:1:1',
    'test-k-check.R:1:1', 'test-legacy-shims.R:5:1', 'test-pair.R:22:3',
    'test-pair.R:30:3', 'test-pair.R:44:3', 'test-pair.R:55:3',
    'test-pair.R:71:3', 'test-pair.R:84:3', 'test-pair.R:91:3',
    'test-pair.R:106:3', 'test-pair.R:127:3', 'test-pair.R:147:3',
    'test-pair.R:161:3', 'test-pair.R:169:3', 'test-pair.R:192:3',
    'test-pair.R:212:3', 'test-pair.R:264:3', 'test-pair.R:283:3',
    'test-pair.R:313:3', 'test-paper-ux.R:11:3', 'test-paper-ux.R:30:3',
    'test-paper-ux.R:39:3', 'test-paper-ux.R:56:3', 'test-paper-ux.R:65:3',
    'test-paper-ux.R:78:3', 'test-paper-ux.R:102:3', 'test-paper-ux.R:119:3',
    'test-paper-ux.R:146:3', 'test-paper-ux.R:168:3', 'test-paper-ux.R:186:3',
    'test-paper-ux.R:213:3', 'test-plot-method.R:50:3',
    'test-plot-method.R:120:3', 'test-plot-method.R:171:3',
    'test-plot-method.R:191:3', 'test-plot-method.R:395:1',
    'test-plot-method.R:402:1', 'test-plot-method.R:409:1',
    'test-plot-method.R:490:3', 'test-plot-method.R:533:3',
    'test-plot-method.R:593:3', 'test-shape-sensitivity.R:1:1',
    'test-snapshot.R:6:1', 'test-snapshot.R:15:1', 'test-snapshot.R:19:1',
    'test-snapshot.R:23:1', 'test-vdiffr.R:18:3', 'test-vdiffr.R:24:3',
    'test-vdiffr.R:31:3', 'test-vdiffr.R:40:3', 'test-vdiffr.R:49:3',
    'test-vdiffr.R:57:3'
  • {kernR} is not installed (24): 'test-direction.R:59:3',
    'test-direction.R:81:3', 'test-direction.R:101:3', 'test-direction.R:118:3',
    'test-direction.R:132:3', 'test-direction.R:151:3', 'test-direction.R:165:3',
    'test-direction.R:186:3', 'test-direction.R:213:3', 'test-direction.R:317:3',
    'test-direction.R:344:3', 'test-direction.R:358:3', 'test-direction.R:370:3',
    'test-direction.R:394:3', 'test-direction.R:433:3', 'test-direction.R:451:3',
    'test-direction.R:466:3', 'test-direction.R:480:3', 'test-direction.R:494:3',
    'test-direction.R:503:3', 'test-direction.R:516:3', 'test-direction.R:527:3',
    'test-direction.R:555:3', 'test-direction.R:581:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-derivatives.R:365:3'): simultaneous bands leave the caller's RNG state unchanged ──
  Expected `m1` to be identical to `m2`.
  Differences:
    `actual`: 2.9179416364965092
  `expected`: 2.9179416364965176
  
  ── Failure ('test-fit-object.R:76:3'): p_adjust adjusts once across the directed cells ──
  Expected `bh$table$association_p` to be identical to `p`.
  Differences:
       actual               | expected                           
   [1] 0.132354593749172855 - 0.132354593749173244 [1]           
   [2] 0.000000000000000000 | 0.000000000000000000 [2]           
   [3] 0.003623185617919189 - 0.003623185617919300 [3]           
   [4] 0.000000000000000000 | 0.000000000000000000 [4]           
   [5] 0.069644592815087281 - 0.069644592815087336 [5]           
   [6] 0.287421223133779491 - 0.287421223133779768 [6]           
   [7] 0.000000000000000000 | 0.000000000000000000 [7]           
   [8] 0.069621817219685300 - 0.069621817219686799 [8]           
   [9] 0.238305895417049107 - 0.238305895417050162 [9]           
  [10] 0.003614976408116921 - 0.003614976408116866 [10]          
   ... ...                    ...                  and 2 more ...
  
  ── Failure ('test-fit-object.R:79:3'): p_adjust adjusts once across the directed cells ──
  Expected `all(bh$table$association_p_adj >= p)` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  ── Failure ('test-fit-object.R:407:3'): janusplot_data() is a deprecated alias of janusplot_fit() ──
  Expected `old` to be identical to `new`.
  Differences:
  actual$pairs[[1]]$pred_yx$fit[1:115] vs expected$pairs[[1]]$pred_yx$fit[1:115]
  - -0.52714583099580736
  + -0.52714583099580670
  - -0.51263794868345269
  + -0.51263794868345225
  - -0.49813025175561076
  + -0.49813025175561021
  - -0.48362292559679421
  + -0.48362292559679354
  - -0.46911615559151576
  + -0.46911615559151509
  - -0.45461012712428872
  + -0.45461012712428794
  - -0.44010502557962539
  + -0.44010502557962439
  - -0.42560103634203827
  + -0.42560103634203761
  - -0.41109834479604057
  + -0.41109834479603968
  - -0.39659713632614502
  + -0.39659713632614435
  and 105 more ...
  
  actual$pairs[[1]]$pred_yx$fit[116:200] vs expected$pairs[[1]]$pred_yx$fit[116:200]
    1.31392290808899381
    1.32928697016079189
    1.34453830762345272
  - 1.35967657504296247
  + 1.35967657504296224
  - 1.37470173768682602
  + 1.37470173768682580
    1.38961377666073260
  - 1.40441284705759428
  + 1.40441284705759406
    1.41909949472040742
  - 1.43367447419722205
  + 1.43367447419722183
    1.44813862107878655
  and 75 more ...
  
  actual$pairs[[1]]$pred_yx$se vs expected$pairs[[1]]$pred_yx$se
  - 0.225822254358521796
  + 0.225822254358521407
  - 0.221492086939514637
  + 0.221492086939514748
  - 0.217217134307287035
  + 0.217217134307286619
  - 0.213001665081245212
  + 0.213001665081244795
  - 0.208849601981290517
  + 0.208849601981290101
  - 0.204764488124699856
  + 0.204764488124699384
  - 0.200749455777636587
  + 0.200749455777636143
  - 0.196807198387773885
  + 0.196807198387774052
  - 0.192939946831802267
  + 0.192939946831802683
  - 0.189149450914681772
  + 0.189149450914681244
  and 190 more ...
  
  actual$pairs[[1]]$pred_yx$lo vs expected$pairs[[1]]$pred_yx$lo
  - -0.96975744953851006
  + -0.96975744953850862
  - -0.94676243908490143
  + -0.94676243908490121
  - -0.92387583499789327
  + -0.92387583499789194
  - -0.90110618915603480
  + -0.90110618915603335
  - -0.87846137547484515
  + -0.87846137547484371
  - -0.85594852384870035
  + -0.85594852384869879
  - -0.83357395890379316
  + -0.83357395890379116
  - -0.81134314518207507
  + -0.81134314518207473
  - -0.78926064058637302
  + -0.78926064058637291
  - -0.76733006011892124
  + -0.76733006011891958
  and 190 more ...
  
  actual$pairs[[1]]$pred_yx$hi vs expected$pairs[[1]]$pred_yx$hi
  - -0.08453421245310466
  + -0.08453421245310477
  - -0.07851345828200401
  + -0.07851345828200335
  - -0.07238466851332820
  + -0.07238466851332842
  - -0.06613966203755361
  + -0.06613966203755373
  - -0.05977093570818637
  + -0.05977093570818648
  - -0.05327173039987704
  + -0.05327173039987715
  - -0.04663609225545767
  + -0.04663609225545756
  - -0.03985892750200148
  + -0.03985892750200049
  - -0.03293604900570812
  + -0.03293604900570646
  - -0.02586421253336874
  + -0.02586421253336912
  and 190 more ...
  
    `actual$pairs[[1]]$edf_yx`: 2.3378270780460770
  `expected$pairs[[1]]$edf_yx`: 2.3378270780460673
  
    `actual$pairs[[1]]$dev_exp_yx`: 0.65606711445851218
  `expected$pairs[[1]]$dev_exp_yx`: 0.65606711445851207
  
    `actual$pairs[[1]]$deviance_gap_yx`: 0.01882946996454449
  `expected$pairs[[1]]$deviance_gap_yx`: 0.01882946996454438
  
    `actual$pairs[[1]]$asymmetry_index`: 0.4007870841251727
  `expected$pairs[[1]]$asymmetry_index`: 0.4007870841251709
  
    `actual$pairs[[1]]$directional_complexity_yx`: 0.4007870841251727
  `expected$pairs[[1]]$directional_complexity_yx`: 0.4007870841251709
  
    `actual$pairs[[1]]$directional_complexity_xy`: -0.4007870841251727
  `expected$pairs[[1]]$directional_complexity_xy`: -0.4007870841251709
  
    `actual$pairs[[1]]$convexity_index_yx`: -0.7002247725513222
  `expected$pairs[[1]]$convexity_index_yx`: -0.7002247725513279
  
  actual$pairs[[1]]$deriv_yx$1$fit vs expected$pairs[[1]]$deriv_yx$1$fit
  - 0.62540909145781121
  + 0.62540909145781232
  - 0.62540109991110804
  + 0.62540109991110904
  - 0.62538911259107055
  + 0.62538911259107166
  - 0.62536913372433989
  + 0.62536913372434100
  - 0.62534116331090694
  + 0.62534116331090794
  - 0.62530520135077827
  + 0.62530520135077938
  - 0.62526124784396109
  + 0.62526124784396209
  - 0.62520930279044773
  + 0.62520930279044873
  - 0.62514936619023331
  + 0.62514936619023442
  - 0.62508156628403311
  + 0.62508156628403422
  and 190 more ...
  
  actual$pairs[[1]]$deriv_yx$1$se vs expected$pairs[[1]]$deriv_yx$1$se
  - 0.23783599194008179
  + 0.23783599194008065
  - 0.23756933140224687
  + 0.23756933140224587
  - 0.23717041971327205
  + 0.23717041971327099
  - 0.23650846071128998
  + 0.23650846071128886
  - 0.23558784628560250
  + 0.23558784628560139
  - 0.23441482824977558
  + 0.23441482824977455
  - 0.23299762340041341
  + 0.23299762340041233
  - 0.23134655117211614
  + 0.23134655117211514
  - 0.22947420558323056
  + 0.22947420558322956
  - 0.22739568235997346
  + 0.22739568235997243
  and 190 more ...
  
  actual$pairs[[1]]$deriv_yx$1$lo vs expected$pairs[[1]]$deriv_yx$1$lo
  - 0.159250547255250896
  + 0.159250547255254227
  - 0.159765210362704191
  + 0.159765210362707133
  - 0.160535089953057375
  + 0.160535089953060539
  - 0.161812550730211557
  + 0.161812550730214832
  - 0.163588984591126030
  + 0.163588984591129194
  - 0.165852137981218117
  + 0.165852137981221281
  - 0.168585905979150796
  + 0.168585905979153905
  - 0.171770062493100117
  + 0.171770062493103060
  - 0.175379923247101444
  + 0.175379923247104497
  - 0.179386028858485147
  + 0.179386028858488256
  and 190 more ...
  
  actual$pairs[[1]]$deriv_yx$1$hi vs expected$pairs[[1]]$deriv_yx$1$hi
  - 1.09156763566037140
  + 1.09156763566037052
  - 1.09103698945951200
  + 1.09103698945951089
  - 1.09024313522908378
  + 1.09024313522908267
  - 1.08892571671846827
  + 1.08892571671846716
  - 1.08709334203068786
  + 1.08709334203068675
  - 1.08475826472033843
  + 1.08475826472033754
  - 1.08193658970877138
  + 1.08193658970877027
  - 1.07864854308779545
  + 1.07864854308779434
  - 1.07491880913336524
  + 1.07491880913336435
  - 1.07077710370958101
  + 1.07077710370958012
  and 190 more ...
  
  actual$pairs[[1]]$deriv_yx$2$fit vs expected$pairs[[1]]$deriv_yx$2$fit
  - -0.000000000001818574114137638
  + -0.000000000001818574114137658
  - -0.000344499212363772247535998
  + -0.000344499212363786125323806
  - -0.000688998423417928884671113
  + -0.000688998423417949701352825
  - -0.001033497636359022309182620
  + -0.001033497636359070881439948
  - -0.001377996848196900991911917
  + -0.001377996848196956503063149
  - -0.001722496060549943974748999
  + -0.001722496060550013363688038
  - -0.002066995271799931810363660
  + -0.002066995271800015077090507
  - -0.002411494484789847292383058
  + -0.002411494484789958314685521
  - -0.002755993696470560028188856
  + -0.002755993696470712683854742
  - -0.003089436520232385907647199
  + -0.003089436520232524685525277
  and 190 more ...
  
  actual$pairs[[1]]$deriv_yx$2$se vs expected$pairs[[1]]$deriv_yx$2$se
  - 0.000000000007509469154496130
  + 0.000000000007509469154496075
  - 0.019641626189018254744489411
  + 0.019641626189018098619376573
  - 0.039283252373612354002574421
  + 0.039283252373612027874560937
  - 0.058924878564944792314062028
  + 0.058924878564944348224852178
  - 0.078566504750626597886054014
  + 0.078566504750626001141178278
  - 0.098208130940437676770216058
  + 0.098208130940436955125250051
  - 0.117849757124546331010783717
  + 0.117849757124545498343515249
  - 0.137491383315794080122174137
  + 0.137491383315793136432603205
  - 0.157133009502129050716234815
  + 0.157133009502127857226483343
  - 0.176749994604192439684453575
  + 0.176749994604191051905672794
  and 190 more ...
  
  actual$pairs[[1]]$deriv_yx$2$lo vs expected$pairs[[1]]$deriv_yx$2$lo
  - -0.000000000016537133656950052
  + -0.000000000016537133656949965
  - -0.038842086542839548979344499
  + -0.038842086542839257545800535
  - -0.077684173075698137456157610
  + -0.077684173075697526833494067
  - -0.116526259623650818575413268
  + -0.116526259623649985908144799
  - -0.155368346159425019248345734
  + -0.155368346159423909025321109
  - -0.194210432703807778231919201
  + -0.194210432703806445964289651
  - -0.233052519235910748918172430
  + -0.233052519235909194605937955
  - -0.271894605783746245997178903
  + -0.271894605783744469640339503
  - -0.310736692320643492770670946
  + -0.310736692320641327835772927
  - -0.349519425944449513288247999
  + -0.349519425944446959775291361
  and 190 more ...
  
  actual$pairs[[1]]$deriv_yx$2$hi vs expected$pairs[[1]]$deriv_yx$2$hi
  - 0.00000000001289998542867478
  + 0.00000000001289998542867465
  - 0.03815308811811200795371946
  + 0.03815308811811168876459988
  - 0.07630617622886229356460319
  + 0.07630617622886162743078842
  - 0.11445926435093276007926022
  + 0.11445926435093184414526490
  - 0.15261235246303123114230971
  + 0.15261235246303000989698262
  - 0.19076544058270789028242120
  + 0.19076544058270639148133796
  - 0.22891852869231088529744511
  + 0.22891852869230916445175694
  - 0.26707161681416657916798840
  + 0.26707161681416458076654408
  - 0.30522470492770237271429323
  + 0.30522470492769987471248783
  - 0.34334055290398479698410483
  + 0.34334055290398191040424081
  and 190 more ...
  
    `actual$pairs[[1]]$k_check_yx$k_index`: 0.81544049949481101
  `expected$pairs[[1]]$k_check_yx$k_index`: 0.81544049949481068
  
    `actual$table$edf`: 1.0000493266412345 2.3378270780460770
  `expected$table$edf`: 1.0000493266412345 2.3378270780460673
  
    `actual$table$dev_exp`: 0.63723773095238578 0.65606711445851218
  `expected$table$dev_exp`: 0.63723773095238578 0.65606711445851207
  
    `actual$table$deviance_gap`: 0.00000008645841809 0.01882946996454449
  `expected$table$deviance_gap`: 0.00000008645841809 0.01882946996454438
  
    `actual$table$asymmetry_index`: 0.4007870841251727 0.4007870841251727
  `expected$table$asymmetry_index`: 0.4007870841251709 0.4007870841251709
  
    `actual$table$directional_complexity`: -0.4007870841251727 0.4007870841251727
  `expected$table$directional_complexity`: -0.4007870841251709 0.4007870841251709
  
    `actual$table$convexity_index`: 0.0000000000000000 -0.7002247725513222
  `expected$table$convexity_index`: 0.0000000000000000 -0.7002247725513279
  
    `actual$table$flat_range_ratio`: 3.74290716662971024 3.77875046286778993
  `expected$table$flat_range_ratio`: 3.74290716662971024 3.77875046286779082
  
    `actual$table$k_index`: 1.23978903979757837 0.81544049949481101
  `expected$table$k_index`: 1.23978903979757837 0.81544049949481068
  
  
  [ FAIL 4 | WARN 0 | SKIP 107 | PASS 1058 ]
  Deleting unused snapshots: 'pair/pair-quadratic-both.svg',
  'pair/pair-quadratic-default.svg', 'vdiffr/diagonal-cell-label.svg',
  'vdiffr/matrix-3var-linear-default.svg',
  'vdiffr/matrix-3var-nonlinear-ascii-glyphs.svg',
  'vdiffr/matrix-3var-nonlinear-fill-pearson.svg',
  'vdiffr/matrix-3var-nonlinear-shape.svg', and 'vdiffr/matrix-colour-none.svg'
  Error:
  ! Test failures.
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [117s/120s] OK
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/localhost/ripley/R/packages/tests-MKL/janusplot.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 5:47.66, 317.26 + 10.15