* using log directory ‘/data/localhost/ripley/R/packages/tests-MKL/fgls.Rcheck’
* using R Under development (unstable) (2026-11-07 r90850)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 16.2.1 20261029 (Red Hat 16.2.1-3)
    GNU Fortran (GCC) 16.2.1 20261029 (Red Hat 16.2.1-3)
* running under: Fedora Linux 44 (Server Edition)
* using session charset: UTF-8
* current time: 2026-11-07 17:44:46 UTC
* using option ‘--no-stop-on-test-error’
* checking for file ‘fgls/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘fgls’ version ‘0.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘fgls’ can be installed ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [16s/17s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘spelling.R’
  Running ‘testthat.R’ [40s/40s]
 [41s/41s] ERROR
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
  > # * https://testthat.r-lib.org/articles/special-files.html
  > 
  > library(testthat)
  > library(fgls)
  > 
  > test_check("fgls")
  Saving _problems/test-serial-315.R
  [ FAIL 1 | WARN 2 | SKIP 17 | PASS 1349 ]
  
  ══ Skipped tests (17) ══════════════════════════════════════════════════════════
  • On CRAN (17): 'test-documentation.R:63:3', 'test-documentation.R:74:3',
    'test-interface.R:133:1', 'test-statistical-crosslang.R:33:3',
    'test-statistical-gp24.R:43:3', 'test-statistical-gp24.R:52:3',
    'test-statistical-gp24.R:66:3', 'test-statistical-gp24.R:71:3',
    'test-statistical-gp24.R:96:3', 'test-statistical-pg26.R:15:3',
    'test-statistical-pg26.R:64:3', 'test-statistical-pg26.R:88:3',
    'test-statistical-pg26.R:98:3', 'test-statistical-pg26.R:111:3',
    'test-statistical-s4.R:44:3', 'test-statistical-s4.R:60:3',
    'test-statistical-s4.R:67:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-serial.R:315:3'): sieve bootstrap gives standard errors close to the analytic ones ──
  Expected `vcov(fb)` to be identical to `vcov(fb2)`.
  Differences:
      actual                 | expected                  
  [1] 0.0131112506902025597  - 0.0131112506902025510  [1]
  [2] -0.0011811862376481289 - -0.0011811862376481224 [2]
  [3] -0.0011811862376481289 - -0.0011811862376481224 [3]
  [4] 0.0031031514126916965  - 0.0031031514126916948  [4]
  
  
  [ FAIL 1 | WARN 2 | SKIP 17 | PASS 1349 ]
  Error:
  ! Test failures.
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [25s/25s] OK
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/localhost/ripley/R/packages/tests-MKL/fgls.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 2:19.65, 122.57 + 9.99