* using log directory ‘/data/localhost/ripley/R/packages/tests-MKL/climatehealth.Rcheck’ * using R Under development (unstable) (2026-10-28 r90786) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2) GNU Fortran (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2) * running under: Fedora Linux 44 (Server Edition) * using session charset: UTF-8 * current time: 2026-10-29 20:22:44 UTC * using option ‘--no-stop-on-test-error’ * checking for file ‘climatehealth/DESCRIPTION’ ... OK * this is package ‘climatehealth’ version ‘1.0.3’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘climatehealth’ can be installed ... [14s/16s] OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [28s/39s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ [123s/129s] [123s/130s] ERROR Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(patrick) > library(climatehealth) > > test_check("climatehealth") This is dlnm 2.4.10. For details: help(dlnm) and vignette('dlnmOverview'). | | | 0% | |=================================== | 50% | |======================================================================| 100% Saving _problems/test_wildfire-1031.R [ FAIL 1 | WARN 1 | SKIP 11 | PASS 2579 ] ══ Skipped tests (11) ══════════════════════════════════════════════════════════ • Skipping diarrhea integration test (1): 'test_diarrhea.R:3:3' • Skipping malaria integration test (1): 'test_malaria.R:3:3' • Skipping on CRAN (9): 'test_air_pollution.R:5628:3', 'test_air_pollution.R:5744:3', 'test_mental_health.R:1832:3', 'test_mental_health.R:1918:3', 'test_temp_mortality.R:2651:3', 'test_temp_mortality.R:2801:3', 'test_wildfire.R:2009:3', 'test_wildfire.R:2087:3', 'test_wildfire.R:2549:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_wildfire.R:1031:9'): casecrossover_quassipoission calculates model values and saves residuals. ── Expected `sort(res$lag)` to equal `0:3`. Differences: Lengths differ: 5 is not 4 [ FAIL 1 | WARN 1 | SKIP 11 | PASS 2579 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/data/localhost/ripley/R/packages/tests-MKL/climatehealth.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 4:30.25, 229.58 + 11.57