* using log directory ‘/data/localhost/ripley/R/packages/tests-MKL/betaregscale.Rcheck’
* using R Under development (unstable) (2026-10-28 r90786)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2)
    GNU Fortran (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2)
* running under: Fedora Linux 44 (Server Edition)
* using session charset: UTF-8
* current time: 2026-10-29 19:10:36 UTC
* using option ‘--no-stop-on-test-error’
* checking for file ‘betaregscale/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘betaregscale’ version ‘3.1.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘betaregscale’ can be installed ... [38s/34s] OK
* used C++ compiler: ‘g++ (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2)’
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [23s/25s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’ [189s/214s]
 [189s/214s] ERROR
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(betaregscale)
  > 
  > test_check("betaregscale")
  brs_prep: n = 7 | exact = 0, left = 2, right = 2, interval = 3
  brs_prep: n = 3 | exact = 0, left = 1, right = 1, interval = 1
  brs_prep: n = 3 | exact = 0, left = 0, right = 0, interval = 3
  brs_prep: n = 5 | exact = 0, left = 1, right = 1, interval = 3
  brs_prep: n = 3 | exact = 0, left = 1, right = 1, interval = 1
  brs_prep: n = 1 | exact = 1, left = 0, right = 0, interval = 0
  brs_prep: n = 1 | exact = 0, left = 1, right = 0, interval = 0
  brs_prep: n = 1 | exact = 0, left = 0, right = 1, interval = 0
  brs_prep: n = 1 | exact = 0, left = 0, right = 0, interval = 1
  brs_prep: n = 1 | exact = 0, left = 1, right = 0, interval = 0
  brs_prep: n = 1 | exact = 0, left = 0, right = 1, interval = 0
  brs_prep: n = 1 | exact = 0, left = 0, right = 0, interval = 1
  brs_prep: n = 1 | exact = 1, left = 0, right = 0, interval = 0
  brs_prep: n = 3 | exact = 3, left = 0, right = 0, interval = 0
  brs_prep: n = 1 | exact = 0, left = 0, right = 0, interval = 1
  brs_prep: n = 4 | exact = 1, left = 1, right = 1, interval = 1
  brs_prep: n = 1 | exact = 0, left = 1, right = 0, interval = 0
  brs_prep: n = 1 | exact = 0, left = 0, right = 1, interval = 0
  brs_prep: n = 1 | exact = 0, left = 0, right = 0, interval = 1
  brs_prep: n = 5 | exact = 0, left = 1, right = 1, interval = 3
  brs_prep: n = 200 | exact = 0, left = 18, right = 21, interval = 161
  brs_prep: n = 200 | exact = 0, left = 13, right = 23, interval = 164
  brs_prep: n = 60 | exact = 0, left = 3, right = 3, interval = 54
  brs_prep: n = 60 | exact = 0, left = 3, right = 3, interval = 54
  brs_prep: n = 60 | exact = 0, left = 3, right = 3, interval = 54
  brs_prep: n = 60 | exact = 0, left = 3, right = 3, interval = 54
  brs_prep: n = 60 | exact = 0, left = 3, right = 3, interval = 54
  brs_prep: n = 60 | exact = 0, left = 3, right = 3, interval = 54
  brs_prep: n = 60 | exact = 0, left = 3, right = 3, interval = 54
  brs_prep: n = 60 | exact = 0, left = 3, right = 3, interval = 54
  brs_prep: n = 60 | exact = 0, left = 3, right = 3, interval = 54
  brs_prep: n = 60 | exact = 0, left = 3, right = 3, interval = 54
  brs_prep: n = 20 | exact = 0, left = 1, right = 1, interval = 18
  brs_prep: n = 20 | exact = 0, left = 1, right = 1, interval = 18
  brs_prep: n = 20 | exact = 0, left = 1, right = 1, interval = 18
  brs_prep: n = 20 | exact = 0, left = 1, right = 1, interval = 18
  brs_prep: n = 20 | exact = 0, left = 1, right = 1, interval = 18
  Saving _problems/test-repar-links-clamps-300.R
  [ FAIL 1 | WARN 4 | SKIP 11 | PASS 2426 ]
  
  ══ Skipped tests (11) ══════════════════════════════════════════════════════════
  • On CRAN (11): 'test-anova-model-selection.R:2:3',
    'test-anova-model-selection.R:50:3', 'test-brsmm-integration.R:6:3',
    'test-brsmm-integration.R:76:3', 'test-brsmm-integration.R:96:3',
    'test-brsmm-integration.R:131:3', 'test-brsmm-integration.R:175:3',
    'test-compiled-derivatives.R:75:3', 'test-compiled-derivatives.R:125:3',
    'test-interval-maps.R:389:3', 'test-repar-links-clamps.R:248:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-repar-links-clamps.R:300:3'): brs() honors attr(data, 'ncuts'/'lim') from brs_prep() ──
  Expected `coef(f100)` to equal `coef(f)`.
  Differences:
    `actual`: 0.40958788168 0.70749588515 -1.39619764324
  `expected`: 0.40958788258 0.70749588492 -1.39619764684
  
  
  [ FAIL 1 | WARN 4 | SKIP 11 | PASS 2426 ]
  Error:
  ! Test failures.
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [35s/41s] OK
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/localhost/ripley/R/packages/tests-MKL/betaregscale.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 6:23.64, 325.85 + 13.42