* using log directory ‘/data/gannet/ripley/R/packages/tests-MKL/bartCause.Rcheck’
* using R Under development (unstable) (2025-12-01 r89083)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
    GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
* running under: Fedora Linux 42 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘bartCause/DESCRIPTION’ ... OK
* this is package ‘bartCause’ version ‘1.0-9’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘bartCause’ can be installed ... [11s/34s] OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [26s/52s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’ [164s/276s]
 [165s/276s] ERROR
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > if (require(testthat, quietly = TRUE)) {
  +   require(bartCause)
  +   test_check("bartCause")
  + } else {
  +   cat("package 'testthat' not available; cannot run unit tests\n")
  + }
  Loading required package: bartCause
  Saving _problems/test-11-stan4bart-88.R
  Saving _problems/test-11-stan4bart-103.R
  [ FAIL 2 | WARN 0 | SKIP 8 | PASS 393 ]
  
  ══ Skipped tests (8) ═══════════════════════════════════════════════════════════
  • On CRAN (8): 'test-04-bartc.R:111:3', 'test-04-bartc.R:134:3',
    'test-04-bartc.R:175:3', 'test-04-bartc.R:226:3', 'test-05-generics.R:189:3',
    'test-06-regression.R:34:3', 'test-11-stan4bart.R:14:3',
    'test-11-stan4bart.R:119:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-11-stan4bart.R:82:3'): semiparametric model does not have constant treatment effect ──
  Error in `.makeCC(action = "message", tol = formals(isSingular)$tol)`: must have a numeric 'tol' component
  Backtrace:
       ▆
    1. └─bartCause::bartc(...) at test-11-stan4bart.R:82:3
    2.   ├─bartCause:::assignAll(eval(responseCall, envir = evalEnv))
    3.   └─base::eval(responseCall, envir = evalEnv)
    4.     └─base::eval(responseCall, envir = evalEnv)
    5.       ├─bartCause:::getBartResponseFit(...)
    6.       │ └─base::eval(stan4bartCall, envir = callingEnv)
    7.       │   └─base::eval(stan4bartCall, envir = callingEnv)
    8.       └─bartCause:::getStan4BartResponseFit(...)
    9.         └─base::eval(stan4bartCall, envir = evalEnv)
   10.           └─base::eval(stan4bartCall, envir = evalEnv)
   11.             └─stan4bart::stan4bart(...)
   12.               └─stan4bart:::make_glmerControl()
   13.                 └─lme4::glmerControl(...)
   14.                   ├─lme4:::chk.cconv(check.conv.singular, me)
   15.                   └─lme4::.makeCC(action = "message", tol = formals(isSingular)$tol)
  ── Error ('test-11-stan4bart.R:97:3'): semiparametric predict works ────────────
  Error in `.makeCC(action = "message", tol = formals(isSingular)$tol)`: must have a numeric 'tol' component
  Backtrace:
      ▆
   1. └─stan4bart::stan4bart(...)
   2.   └─stan4bart:::make_glmerControl()
   3.     └─lme4::glmerControl(...)
   4.       ├─lme4:::chk.cconv(check.conv.singular, me)
   5.       └─lme4::.makeCC(action = "message", tol = formals(isSingular)$tol)
  
  [ FAIL 2 | WARN 0 | SKIP 8 | PASS 393 ]
  Error:
  ! Test failures.
  Execution halted
* checking PDF version of manual ... [7s/10s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/gannet/ripley/R/packages/tests-MKL/bartCause.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 7:12.39, 231.04 + 9.55