* using log directory ‘/data/gannet/ripley/R/packages/tests-MKL/RClone.Rcheck’ * using R Under development (unstable) (2022-03-07 r81852) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘RClone/DESCRIPTION’ ... OK * this is package ‘RClone’ version ‘1.0.3’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘RClone’ can be installed ... [11s/20s] OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [24s/39s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [34s/53s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat_p1.R’ [14s/19s] Running ‘testthat_p2.R’ Running ‘testthat_p3.R’ [13s/19s] Running ‘testthat_p4.R’ Running ‘testthat_p5.R’ [18s/22s] [50s/67s] ERROR Running the tests in ‘tests/testthat_p3.R’ failed. Complete output: > #testing Randy Zwitch solution > > library(testthat) > library(RClone) > test_check("RClone", filter = "p3") [1] "Number of MLG sim = 9" [ FAIL 1 | WARN 0 | SKIP 1 | PASS 47 ] ══ Skipped tests ═══════════════════════════════════════════════════════════════ • On CRAN (1) ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure (test_package_RClone_p3.R:19:2): the genet_dist functions work ────── length(prev2[[1]]) not equal to 45. 1/1 mismatches [1] 36 - 45 == -9 [ FAIL 1 | WARN 0 | SKIP 1 | PASS 47 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking re-building of vignette outputs ... [126s/150s] OK * checking PDF version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/data/gannet/ripley/R/packages/tests-MKL/RClone.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 6:42.15, 277.89 + 14.09