* using log directory ‘/data/localhost/ripley/R/packages/tests-BLIS/tram.Rcheck’
* using R Under development (unstable) (2026-08-27 r90452)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2)
    GNU Fortran (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2)
* running under: Fedora Linux 44 (Server Edition)
* using session charset: UTF-8
* current time: 2026-09-01 11:48:27 UTC
* using option ‘--no-stop-on-test-error’
* checking for file ‘tram/DESCRIPTION’ ... OK
* this is package ‘tram’ version ‘1.4-5’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘tram’ can be installed ... [8s/19s] OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [16s/39s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking sizes of PDF files under ‘inst/doc’ ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [35s/84s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘Coxph-Ex.R’ [9s/21s]
  Comparing ‘Coxph-Ex.Rout’ to ‘Coxph-Ex.Rout.save’ ... OK
  Running ‘KaplanMeier-Ex.R’
  Running ‘PI_OVL-Ex.R’
  Running ‘Polr-Ex.R’ [6s/13s]
  Comparing ‘Polr-Ex.Rout’ to ‘Polr-Ex.Rout.save’ ... OK
  Running ‘Survreg-Ex.R’
  Comparing ‘Survreg-Ex.Rout’ to ‘Survreg-Ex.Rout.save’ ... OK
  Running ‘bugfixes.R’ [69s/163s]
  Running ‘intercepts-Ex.R’
  Comparing ‘intercepts-Ex.Rout’ to ‘intercepts-Ex.Rout.save’ ...
37c37
<        1.39        1.89       -0.10       -0.03 
---
>        1.39        1.88       -0.10       -0.04 
  Running ‘mmlt-Ex.R’ [125s/272s]
  Comparing ‘mmlt-Ex.Rout’ to ‘mmlt-Ex.Rout.save’ ... OK
  Running ‘mmlt-interface.R’ [35s/93s]
  Running ‘mtram-Ex.R’ [7s/21s]
  Comparing ‘mtram-Ex.Rout’ to ‘mtram-Ex.Rout.save’ ... OK
  Running ‘stram-Ex.R’ [23s/71s]
  Comparing ‘stram-Ex.Rout’ to ‘stram-Ex.Rout.save’ ... OK
 [5m/11m] NOTE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [12m/39m] OK
* checking PDF version of manual ... [5s/14s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 NOTE
See
  ‘/data/localhost/ripley/R/packages/tests-BLIS/tram.Rcheck/00check.log’
for details.

Time 54:56.11, 1082.18 + 21.88