* using log directory ‘/data/gannet/ripley/R/packages/tests-ATLAS/scan.Rcheck’
* using R Under development (unstable) (2026-04-09 r89843)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)
    GNU Fortran (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)
* running under: Fedora Linux 42 (Workstation Edition)
* using session charset: UTF-8
* current time: 2026-04-09 19:01:53 UTC
* using option ‘--no-stop-on-test-error’
* checking for file ‘scan/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘scan’ version ‘0.68.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘scan’ can be installed ... [37s/77s] OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [72s/107s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking examples ... [38s/39s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’ [16s/33s]
 [16s/33s] ERROR
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/tests.html
  > # * https://testthat.r-lib.org/reference/test_package.html#special-files
  > 
  > library(testthat)
  > library(scan)
  scan 0.68.0 (2026-04-01)
  Click 'Addins -> scdf Import' to start the import helper.
  
  Attaching package: 'scan'
  
  The following object is masked from 'package:testthat':
  
      describe
  
  > 
  > test_check("scan")
  Saving _problems/test-between_smd-13.R
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 96 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-between_smd.R:13:3'): between_smd returns sc_bcsmd with REML models and expected columns ──
  Expected `object_checksum(res_no_resid)` to equal "1260.1821".
  Differences:
  `actual`:   "1260.1820"
  `expected`: "1260.1821"
  
  
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 96 ]
  Error:
  ! Test failures.
  Execution halted
* checking PDF version of manual ... [15s/26s] OK
* checking HTML version of manual ... [17s/21s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/gannet/ripley/R/packages/tests-ATLAS/scan.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 7:54.26, 291.31 + 18.42