* using log directory ‘/data/gannet/ripley/R/packages/tests-ATLAS/NMsim.Rcheck’
* using R Under development (unstable) (2025-04-25 r88178)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc-15 (GCC) 15.1.0
    GNU Fortran (GCC) 15.1.0
* running under: Fedora Linux 40 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘NMsim/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘NMsim’ version ‘0.2.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... INFO
Package suggested but not available for checking: ‘simpar’
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘NMsim’ can be installed ... [13s/16s] OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [27s/34s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’ [40s/48s]
 [41s/48s] ERROR
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(NMsim)
  NMsim 0.2.1. Browse NMsim documentation at
  https://NMautoverse.github.io/NMsim/
  > 
  > test_check("NMsim")
  [ FAIL 2 | WARN 0 | SKIP 0 | PASS 114 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test_NMsim_VarCov.R:57:9'): Basic ─────────────────────────────────
  `mod` has changed from known value recorded in 'testReference/NMsim_VarCov_01.rds'.
  Component "THETA": 5 string mismatches
  Component "OMEGA": 1 string mismatch
  Backtrace:
      ▆
   1. └─testthat::expect_equal_to_reference(mod, fileRef) at test_NMsim_VarCov.R:57:9
   2.   └─testthat::expect_known_value(..., update = update)
  ── Failure ('test_sampleParsSimpar.R:57:5'): mvrnorm through samplePars() ──────
  `pars.mvrnorm` has changed from known value recorded in 'testReference/samplePars_03.rds'.
  Column 'value': Mean relative difference: 0.0002003509
  Backtrace:
      ▆
   1. └─testthat::expect_equal_to_reference(pars.mvrnorm, fileRef) at test_sampleParsSimpar.R:57:5
   2.   └─testthat::expect_known_value(..., update = update)
  
  [ FAIL 2 | WARN 0 | SKIP 0 | PASS 114 ]
  Error: Test failures
  Execution halted
* checking PDF version of manual ... [12s/16s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/gannet/ripley/R/packages/tests-ATLAS/NMsim.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 2:56.11, 127.89 + 9.93