* using log directory ‘/Users/ripley/R/packages/tests-devel/tinyVAST.Rcheck’
* using R Under development (unstable) (2026-07-28 r90311)
* using platform: aarch64-apple-darwin25.5.0
* R was compiled by
    Apple clang version 21.0.0 (clang-2100.1.1.101)
    GNU Fortran (GCC) 14.2.0
* running under: macOS Tahoe 26.6
* using session charset: UTF-8
* current time: 2026-07-28 17:17:06 UTC
* using option ‘--no-stop-on-test-error’
* checking for file ‘tinyVAST/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘tinyVAST’ version ‘1.6.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘tinyVAST’ can be installed ... [67s/69s] OK
* used C++ compiler: ‘Apple clang version 21.0.0 (clang-2100.1.1.101)’
* used SDK: ‘MacOSX26.5.sdk’
* checking installed package size ... INFO
  installed size is  9.5Mb
  sub-directories of 1Mb or more:
    data   3.1Mb
    help   1.1Mb
    libs   4.3Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’ [28s/16s]
 [28s/16s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [64s/65s] ERROR
Error(s) in re-building vignettes:
--- re-building ‘dsem.Rmd’ using rmarkdown
Read 5 records
--- finished re-building ‘dsem.Rmd’

--- re-building ‘mgcv.Rmd’ using rmarkdown

Quitting from mgcv.Rmd:106-110 [unnamed-chunk-7]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlib_error_dots_nonempty>
Error in `plot()`:
! `...` must be empty.
✖ Problematic argument:
• what = "p_g"
---
Backtrace:
    ▆
 1. └─visreg::visreg(myfit, xvar = "group", what = "p_g")
 2.   └─visreg:::finalize_visreg(v, plot, ...)
 3.     ├─base::plot(v, ...)
 4.     └─visreg:::plot.visreg(v, ...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'mgcv.Rmd' failed with diagnostics:
`...` must be empty.
✖ Problematic argument:
• what = "p_g"
--- failed re-building ‘mgcv.Rmd’

--- re-building ‘model-description.Rmd’ using rmarkdown
[WARNING] Citeproc: citation wood_generalized_2006 not found
--- finished re-building ‘model-description.Rmd’

--- re-building ‘multiple_data.Rmd’ using rmarkdown
--- finished re-building ‘multiple_data.Rmd’

--- re-building ‘spatial.Rmd’ using rmarkdown
--- finished re-building ‘spatial.Rmd’

--- re-building ‘spatial_factor_analysis.Rmd’ using rmarkdown
--- finished re-building ‘spatial_factor_analysis.Rmd’

SUMMARY: processing the following file failed:
  ‘mgcv.Rmd’

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/Users/ripley/R/packages/tests-devel/tinyVAST.Rcheck/00check.log’
for details.

      220.95 real       212.21 user        15.34 sys