* using log directory ‘/Users/ripley/R/packages/tests-devel/reproducible.Rcheck’
* using R Under development (unstable) (2026-05-15 r90061)
* using platform: aarch64-apple-darwin25.5.0
* R was compiled by
    Apple clang version 21.0.0 (clang-2100.1.1.101)
    GNU Fortran (GCC) 14.2.0
* running under: macOS Tahoe 26.5
* using session charset: UTF-8
* current time: 2026-05-16 14:15:49 UTC
* using option ‘--no-stop-on-test-error’
* checking for file ‘reproducible/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘reproducible’ version ‘3.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘reproducible’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘test-all.R’ [26s/27s]
 [26s/27s] ERROR
Running the tests in ‘tests/test-all.R’ failed.
Complete output:
  > library(testthat)
  > 
  > # NOTE: ALL OPTIONS ARE BEING SET IN tests/testthat/setup.R
  > 
  > ## Test matrix: 5 combinations of {raster, terra} × {USE_DBI, no DBI} +
  > ## qs cache format. Running them sequentially in one R session was the
  > ## documented behavior, but on ubuntu CI it triggered SIGTERM mass-kills
  > ## (cumulative memory pressure from 5 test_check passes loading namespaces
  > ## + raster/SF objects without releasing between iterations). Bisect on
  > ## branch `bisect-ubuntu-fail` confirmed the SINGLE-pass full suite
  > ## passes; only the 5-pass version wedges. Default to single pass; opt
  > ## back into the full matrix via R_REPRO_TEST_FULL_MATRIX=true (e.g.
  > ## locally or on a separate workflow) when you want the full coverage.
  > if (nzchar(Sys.getenv("R_REPRO_TEST_FULL_MATRIX")) &&
  +     as.logical(Sys.getenv("R_REPRO_TEST_FULL_MATRIX"))) {
  +   ## Full 5-combo matrix (opt-in)
  +   Sys.setenv(R_REPRODUCIBLE_RASTER_READ = "raster::raster")
  +   Sys.setenv(R_REPRODUCIBLE_USE_DBI = "false")
  +   test_check("reproducible")
  + 
  +   Sys.setenv(R_REPRODUCIBLE_RASTER_READ = "raster::raster")
  +   Sys.setenv(R_REPRODUCIBLE_USE_DBI = "true")
  +   test_check("reproducible")
  + 
  +   Sys.setenv(R_REPRODUCIBLE_RASTER_READ = "terra::rast") ## default
  +   Sys.setenv(R_REPRODUCIBLE_USE_DBI = "false") ## default
  +   test_check("reproducible")
  + 
  +   Sys.setenv(R_REPRODUCIBLE_RASTER_READ = "terra::rast")
  +   Sys.setenv(R_REPRODUCIBLE_USE_DBI = "true")
  +   test_check("reproducible")
  + 
  +   Sys.setenv(R_REPRODUCIBLE_CACHESAVEFORMAT = "qs") ## default
  +   Sys.setenv(R_REPRODUCIBLE_USE_DBI = "false") ## default
  +   test_check("reproducible")
  + 
  + } else {
  +   ## Single pass at defaults (terra + USE_DBI=FALSE + qs format).
  +   ## Covers ~95% of the test surface; alternate raster/DBI paths are
  +   ## still exercised by individual test files that explicitly opt in.
  +   test_check("reproducible")
  + }
  Loading required package: reproducible
  
  Attaching package: 'data.table'
  
  The following object is masked from 'package:base':
  
      %notin%
  
  [ FAIL 6 | WARN 18 | SKIP 105 | PASS 688 ]
  
  ══ Skipped tests (105) ═════════════════════════════════════════════════════════
  • No Drive token (3): 'test-misc.R:141:3', 'test-prepInputs.R:1303:3',
    'test-prepInputs.R:1322:3'
  • On CRAN (99): 'test-cache.R:158:3', 'test-cache.R:924:3',
    'test-cache.R:944:3', 'test-cache.R:1157:3', 'test-cache.R:1723:3',
    'test-cache.R:1846:3', 'test-cache.R:1858:3', 'test-cacheGeo.R:2:3',
    'test-cloud.R:2:3', 'test-cloud.R:147:3', 'test-cloud.R:190:3',
    'test-cloud.R:214:3', 'test-cloud.R:238:3', 'test-cluster.R:2:3',
    'test-destinationPathShared.R:742:3', 'test-destinationPathShared.R:1152:1',
    'test-destinationPathShared.R:1201:1', 'test-download.R:2:3',
    'test-download.R:14:3', 'test-filesMissingExtension.R:2:3',
    'test-filesMissingExtension.R:19:3', 'test-filesMissingExtension.R:36:3',
    'test-filesMissingExtension.R:54:3', 'test-filesMissingExtension.R:71:3',
    'test-gis.R:2:3', 'test-lazyAsyncSpawn.R:6:3', 'test-lazyAsyncSpawn.R:41:3',
    'test-misc.R:62:3', 'test-omitArgsTRUE.R:5:3', 'test-omitArgsTRUE.R:47:3',
    'test-postProcess.R:2:3', 'test-postProcess.R:231:3',
    'test-postProcess.R:279:3', 'test-preProcessDoesntWork.R:2:3',
    'test-preProcessDoesntWork.R:130:3', 'test-preProcessDoesntWork.R:146:3',
    'test-preProcessDoesntWork.R:160:3', 'test-preProcessDoesntWork.R:196:3',
    'test-preProcessWorks.R:2:3', 'test-preProcessWorks.R:13:3',
    'test-preProcessWorks.R:24:3', 'test-preProcessWorks.R:33:3',
    'test-preProcessWorks.R:55:3', 'test-preProcessWorks.R:78:3',
    'test-preProcessWorks.R:90:3', 'test-preProcessWorks.R:104:3',
    'test-preProcessWorks.R:120:3', 'test-preProcessWorks.R:135:3',
    'test-preProcessWorks.R:151:3', 'test-preProcessWorks.R:166:3',
    'test-preProcessWorks.R:183:3', 'test-preProcessWorks.R:206:3',
    'test-preProcessWorks.R:236:3', 'test-preProcessWorks.R:251:3',
    'test-preProcessWorks.R:266:3', 'test-preProcessWorks.R:281:3',
    'test-preProcessWorks.R:292:3', 'test-preProcessWorks.R:308:3',
    'test-preProcessWorks.R:326:3', 'test-preProcessWorks.R:337:3',
    'test-preProcessWorks.R:352:3', 'test-preProcessWorks.R:367:3',
    'test-preProcessWorks.R:383:3', 'test-preProcessWorks.R:412:3',
    'test-preProcessWorks.R:433:3', 'test-preProcessWorks.R:443:3',
    'test-preProcessWorks.R:465:3', 'test-preProcessWorks.R:519:3',
    'test-preProcessWorks.R:546:3', 'test-preProcessWorks.R:663:3',
    'test-prepInputs-large-files.R:2:3', 'test-prepInputs-large-files.R:34:3',
    'test-prepInputs-large-files.R:58:3', 'test-prepInputs.R:2:3',
    'test-prepInputs.R:180:3', 'test-prepInputs.R:321:3',
    'test-prepInputs.R:1226:3', 'test-prepInputs.R:1439:3',
    'test-prepInputs.R:1614:3', 'test-prepInputs.R:1705:3',
    'test-prepInputs.R:1980:3', 'test-prepInputs.R:2002:3',
    'test-prepInputs.R:2133:3', 'test-prepInputs.R:2178:3',
    'test-prepInputsCOG.R:36:3', 'test-prepInputsCOG.R:48:3',
    'test-prepInputsInNestedArchives.R:2:3',
    'test-prepInputsInNestedArchives.R:13:3',
    'test-prepInputsInNestedArchives.R:28:3',
    'test-prepInputsInNestedArchives.R:39:3',
    'test-prepInputsInNestedArchives.R:59:5',
    'test-prepInputsInNestedArchives.R:82:5',
    'test-prepInputsInNestedArchives.R:104:5',
    'test-prepInputsInNestedArchives.R:127:5',
    'test-prepInputsInNestedArchives.R:152:5',
    'test-prepInputsInNestedArchives.R:174:3', 'test-prepInputsUrlTiles.R:2:3',
    'test-showCacheCorruptFile.R:8:3', 'test-symlinks.R:2:3'
  • On Mac (1): 'test-prepInputs.R:2210:3'
  • Only relevant for DBI backend (1): 'test-cache.R:1903:3'
  • empty test (1): 'test-examples.R:1:1'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-destinationPathShared.R:256:3'): H1: file in destinationPathShared with matching CHECKSUMS → hardlinked, no copy ──
  Expected `isTRUE(sameInode(file.path(dest, "foo.csv"), fixShared$path))` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  destinationPath copy should share inode with destinationPathShared (hardlink)
  ── Failure ('test-destinationPathShared.R:310:3'): H5: two destinationPathShared entries; file only in second → found ──
  Expected `isTRUE(sameInode(file.path(dest, "foo.csv"), fixShared$path))` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  ── Failure ('test-destinationPathShared.R:336:3'): H6: file in both destinationPathShared entries → first wins ──
  Expected `isTRUE(sameInode(file.path(dest, "foo.csv"), fix1$path))` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  deterministic order: first destinationPathShared entry wins
  ── Failure ('test-destinationPathShared.R:689:3'): B1: legacy reproducible.inputPaths still works (regression guard) ──
  Expected `isTRUE(sameInode(file.path(dest, "foo.csv"), fixShared$path))` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  ── Failure ('test-destinationPathShared.R:733:3'): I1+I2: Cache(prepInputs(...)) — cold uses destinationPathShared; warm is cache hit ──
  Expected `isTRUE(sameInode(file.path(dest, "foo.csv"), fixShared$path))` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  ── Failure ('test-destinationPathShared.R:1197:3'): C5: deleted local file + stale sidecar + file in destinationPathShared → relink, no download ──
  Expected `isTRUE(sameInode(file.path(dest, "foo.csv"), fixShared$path))` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  C5: should hardlink from destinationPathShared, not re-download
  
  [ FAIL 6 | WARN 18 | SKIP 105 | PASS 688 ]
  Error:
  ! Test failures.
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/Users/ripley/R/packages/tests-devel/reproducible.Rcheck/00check.log’
for details.

       83.36 real        66.98 user        12.12 sys