* using log directory ‘/Users/ripley/R/packages/tests-devel/nanny.Rcheck’
* using R Under development (unstable) (2021-04-08 r80148)
* using platform: aarch64-apple-darwin20.3.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘nanny/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘nanny’ version ‘0.1.8’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘nanny’ can be installed ... [6s/16s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from:
  ‘knitr’ ‘lifecycle’ ‘lme4’ ‘methods’
  All declared Imports should be used.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [5s/16s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... ERROR
Running examples in ‘nanny-Ex.R’ failed
The error most likely occurred in:

> ### Name: rotate_dimensions
> ### Title: Rotate two dimensions (e.g., principal components) of an
> ###   arbitrary angle
> ### Aliases: rotate_dimensions rotate_dimensions,spec_tbl_df-method
> ###   rotate_dimensions,tbl_df-method
> 
> ### ** Examples
> 
> 
>  mtcars_tidy_MDS = reduce_dimensions(mtcars_tidy, car_model, feature, value, method="MDS")
nanny says: to access the raw results do `attr(..., "internals")$MDS`
>  
>  rotate_dimensions(mtcars_tidy_MDS, `Dim1`, `Dim2`, .element = car_model, rotation_degrees = 45)
Error: Can't subset columns that don't exist.
✖ Column `Dim1` doesn't exist.
Backtrace:
     █
  1. ├─nanny::rotate_dimensions(...)
  2. ├─nanny::rotate_dimensions(...)
  3. │ └─nanny:::get_rotated_dimensions(...)
  4. │   └─`%>%`(...)
  5. ├─dplyr::pull(., n)
  6. ├─dplyr::ungroup(.)
  7. ├─dplyr::tally(.)
  8. ├─dplyr::group_by_at(...)
  9. │ └─dplyr:::manip_at(...)
 10. │   └─dplyr:::tbl_at_syms(.tbl, .vars, .include_group_vars = .include_group_vars)
 11. │     └─dplyr:::tbl_at_vars(tbl, vars, .include_group_vars = .include_group_vars)
 12. │       └─dplyr::tbl_vars(tbl)
 13. │         ├─dplyr:::new_sel_vars(tbl_vars_dispatch(x), group_vars(x))
 14. │         │ └─base::structure(...)
 15. │         └─dplyr:::tbl_vars_dispatch(x)
 16. ├─dplyr::distinct(.)
 17. ├─dplyr::select(., !!.element, !!dimension_1_column, !!dimension_2_column)
 18. └─dplyr:::select.data.frame(...)
 19.   └─tidyselect::eval_select(expr(c(...)), .data)
 20.     └─tidyselect:::eval_select_impl(...)
 21.       ├─tidyselect:::with_subscript_errors(...)
 22.       │ ├─base::tryCatch(...)
 23.       │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
 24.       │ │   └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
 25.       │ │     └─base:::doTryCatch(return(expr), name, parentenv, handler)
 26.       │ └─tidyselect:::instrument_base_errors(expr)
 27.       │   └─base::withCallingHandlers(...)
 28.       └─tidyselect:::vars_select_eval(...)
 29.         └─tidyselect:::walk_data_tree(expr, data_mask, context_mask)
 30.           └─tidyselect:::eval_c(expr, data_mask, context_mask)
 31.             └─tidyselect:::reduce_sels(node, data_mask, context_mask, init = init)
 32.               └─tidyselect:::walk_data_tree(new, data_mask, context_mask)
 33.                 └─tidyselect:::as_indices_sel_impl(...)
 34.                   └─tidyselect:::as_indices_impl(x, vars, strict = strict)
 35.                     └─tidyselect:::chr_as_locations(x, vars)
 36.                       └─vctrs::vec_as_location(x, n = length(vars), names = vars)
 37.                         └─(function () ...
 38.                           └─vctrs:::stop_subscript_oob(...)
 39.                             └─vctrs:::stop_subscript(...)
Execution halted
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 ERROR
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(nanny)
  
  Attaching package: 'nanny'
  
  The following object is masked from 'package:base':
  
      subset
  
  > 
  > test_check("nanny")
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure (test-methods.R:21:3): reduce dimension MDS ─────────────────────────
  ncol(res) not equal to 8.
  1/1 mismatches
  [1] 6 - 8 == -2
  ── Failure (test-methods.R:24:3): reduce dimension MDS ─────────────────────────
  ncol(res) not equal to 8.
  1/1 mismatches
  [1] 6 - 8 == -2
  ── Error (test-methods.R:29:3): rotate dimensions ──────────────────────────────
  Error: Can't subset columns that don't exist.
  ✖ Column `Dim1` doesn't exist.
  Backtrace:
       █
    1. ├─`%>%`(...) test-methods.R:29:2
    2. ├─nanny::rotate_dimensions(...)
    3. ├─nanny::rotate_dimensions(...)
    4. │ └─nanny:::get_rotated_dimensions(...)
    5. │   └─`%>%`(...)
    6. ├─dplyr::pull(., n)
    7. ├─dplyr::ungroup(.)
    8. ├─dplyr::tally(.)
    9. ├─dplyr::group_by_at(...)
   10. │ └─dplyr:::manip_at(...)
   11. │   └─dplyr:::tbl_at_syms(.tbl, .vars, .include_group_vars = .include_group_vars)
   12. │     └─dplyr:::tbl_at_vars(tbl, vars, .include_group_vars = .include_group_vars)
   13. │       └─dplyr::tbl_vars(tbl)
   14. │         ├─dplyr:::new_sel_vars(tbl_vars_dispatch(x), group_vars(x))
   15. │         │ └─base::structure(...)
   16. │         └─dplyr:::tbl_vars_dispatch(x)
   17. ├─dplyr::distinct(.)
   18. ├─dplyr::select(., !!.element, !!dimension_1_column, !!dimension_2_column)
   19. └─dplyr:::select.data.frame(...)
   20.   └─tidyselect::eval_select(expr(c(...)), .data)
   21.     └─tidyselect:::eval_select_impl(...)
   22.       ├─tidyselect:::with_subscript_errors(...)
   23.       │ ├─base::tryCatch(...)
   24.       │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
   25.       │ │   └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   26.       │ │     └─base:::doTryCatch(return(expr), name, parentenv, handler)
   27.       │ └─tidyselect:::instrument_base_errors(expr)
   28.       │   └─base::withCallingHandlers(...)
   29.       └─tidyselect:::vars_select_eval(...)
   30.         └─tidyselect:::walk_data_tree(expr, data_mask, context_mask)
   31.           └─tidyselect:::eval_c(expr, data_mask, context_mask)
   32.             └─tidyselect:::reduce_sels(node, data_mask, context_mask, init = init)
   33.               └─tidyselect:::walk_data_tree(new, data_mask, context_mask)
   34.                 └─tidyselect:::as_indices_sel_impl(...)
   35.                   └─tidyselect:::as_indices_impl(x, vars, strict = strict)
   36.                     └─tidyselect:::chr_as_locations(x, vars)
   37.                       └─vctrs::vec_as_location(x, n = length(vars), names = vars)
   38.                         └─(function () ...
   39.                           └─vctrs:::stop_subscript_oob(...)
   40.                             └─vctrs:::stop_subscript(...)
  
  [ FAIL 3 | WARN 6 | SKIP 0 | PASS 28 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking re-building of vignette outputs ... WARNING
Error(s) in re-building vignettes:
--- re-building ‘introdution.Rmd’ using knitr
Warning: attributes are not identical across measure variables;
they will be dropped
nanny says: to access the raw results do `attr(..., "internals")$MDS`
Quitting from lines 130-137 (introdution.Rmd) 
Error: processing vignette 'introdution.Rmd' failed with diagnostics:
Make sure your numeric 'columns' values are less than or equal to 3.
	columns = c(4, 5, 6)
--- failed re-building ‘introdution.Rmd’

SUMMARY: processing the following file failed:
  ‘introdution.Rmd’

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 2 ERRORs, 1 WARNING, 1 NOTE
See
  ‘/Users/ripley/R/packages/tests-devel/nanny.Rcheck/00check.log’
for details.

       51.06 real        39.90 user         4.70 sys