* using log directory ‘/Users/ripley/R/packages/tests-devel/covid19br.Rcheck’ * using R Under development (unstable) (2025-09-04 r88793) * using platform: aarch64-apple-darwin24.6.0 * R was compiled by Apple clang version 17.0.0 (clang-1700.3.19.1) GNU Fortran (GCC) 14.2.0 * running under: macOS Sequoia 15.6.1 * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘covid19br/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘covid19br’ version ‘1.0.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘covid19br’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ [10s/14s] [10s/15s] ERROR Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(covid19br) > > test_check("covid19br") [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_covid19br.R:16:1'): (code run outside of `test_that()`) ──────── Error in `if (level == "cities") { data <- data %>% filter(!is.na(.data$pop)) }`: argument is of length zero Backtrace: ▆ 1. ├─regions %>% filter(date == max(date)) %>% add_geo() %>% ... at test_covid19br.R:16:1 2. ├─covid19br::add_epi_rates(.) 3. │ └─base::nrow(data) 4. └─covid19br::add_geo(.) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] Error: Test failures Execution halted * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/Users/ripley/R/packages/tests-devel/covid19br.Rcheck/00check.log’ for details. 37.82 real 27.64 user 4.00 sys