* using log directory ‘/Users/ripley/R/packages/tests-devel/couplr.Rcheck’ * using R Under development (unstable) (2026-01-19 r89307) * using platform: aarch64-apple-darwin25.2.0 * R was compiled by Apple clang version 17.0.0 (clang-1700.6.3.2) GNU Fortran (GCC) 14.2.0 * running under: macOS Tahoe 26.2 * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘couplr/DESCRIPTION’ ... OK * this is package ‘couplr’ version ‘1.0.6’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘couplr’ can be installed ... [51s/52s] OK * used C++ compiler: ‘Apple clang version 17.0.0 (clang-1700.6.3.2)’ * used SDK: ‘MacOSX26.2.sdk’ * checking C++ specification ... INFO specified C++17 * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ [36s/19s] [36s/19s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [104s/105s] ERROR Error(s) in re-building vignettes: --- re-building ‘algorithms.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘algorithms.Rmd’ --- re-building ‘comparison.Rmd’ using rmarkdown Quitting from comparison.Rmd:680-723 [lalonde-balance] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `select()`: ! unused arguments (variable, std_diff) --- Backtrace: ▆ 1. ├─... %>% mutate(stage = "After") 2. └─dplyr::mutate(., stage = "After") ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'comparison.Rmd' failed with diagnostics: unused arguments (variable, std_diff) --- failed re-building ‘comparison.Rmd’ --- re-building ‘getting-started.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘getting-started.Rmd’ --- re-building ‘matching-workflows.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘matching-workflows.Rmd’ --- re-building ‘pixel-morphing.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. [WARNING] Could not fetch resource images/ImageA_80.png [WARNING] Could not fetch resource images/ImageB_80.png [WARNING] Could not fetch resource images/circleA_80.png [WARNING] Could not fetch resource images/circleB_80.png --- finished re-building ‘pixel-morphing.Rmd’ --- re-building ‘troubleshooting.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘troubleshooting.Rmd’ SUMMARY: processing the following file failed: ‘comparison.Rmd’ Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/Users/ripley/R/packages/tests-devel/couplr.Rcheck/00check.log’ for details. 205.20 real 201.98 user 17.32 sys