* using log directory ‘/Users/ripley/R/packages/tests-devel/clustord.Rcheck’ * using R Under development (unstable) (2026-03-01 r89506) * using platform: aarch64-apple-darwin25.3.0 * R was compiled by Apple clang version 21.0.0 (clang-2100.0.121.2) GNU Fortran (GCC) 14.2.0 * running under: macOS Tahoe 26.3 * using session charset: UTF-8 * current time: 2026-03-02 06:57:28 UTC * using option ‘--no-stop-on-test-error’ * checking for file ‘clustord/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘clustord’ version ‘2.0.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘clustord’ can be installed ... OK * used C++ compiler: ‘Apple clang version 21.0.0 (clang-2100.0.121.2)’ * used SDK: ‘MacOSX26.4.sdk’ * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ [69s/69s] [69s/69s] ERROR Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(clustord) > > test_check("clustord") Saving _problems/test_reorder_row-772.R Saving _problems/test_reorder_row-773.R Saving _problems/test_reorder_row-775.R Saving _problems/test_reorder_row-786.R Saving _problems/test_reorder_row-788.R Saving _problems/test_reorder_row-791.R Saving _problems/test_reorder_row-792.R Saving _problems/test_reorder_row-796.R Saving _problems/test_reorder_row-797.R Saving _problems/test_reorder_row-805.R Saving _problems/test_reorder_row-806.R Saving _problems/test_reorder_row-808.R Saving _problems/test_reorder_row-822.R Saving _problems/test_reorder_row-823.R Saving _problems/test_reorder_row-825.R Saving _problems/test_reorder_row-836.R Saving _problems/test_reorder_row-838.R Saving _problems/test_reorder_row-842.R Saving _problems/test_reorder_row-843.R Saving _problems/test_reorder_row-847.R Saving _problems/test_reorder_row-848.R Saving _problems/test_reorder_row-855.R Saving _problems/test_reorder_row-856.R Saving _problems/test_reorder_row-858.R Saving _problems/test_reorder_row-873.R Saving _problems/test_reorder_row-874.R Saving _problems/test_reorder_row-876.R Saving _problems/test_reorder_row-880.R Saving _problems/test_reorder_row-882.R Saving _problems/test_reorder_row-885.R Saving _problems/test_reorder_row-886.R Saving _problems/test_reorder_row-887.R Saving _problems/test_reorder_row-890.R Saving _problems/test_reorder_row-891.R Saving _problems/test_reorder_row-892.R Saving _problems/test_reorder_row-899.R Saving _problems/test_reorder_row-902.R Saving _problems/test_reorder_row-912.R Saving _problems/test_reorder_row-913.R Saving _problems/test_reorder_row-915.R Saving _problems/test_reorder_row-920.R Saving _problems/test_reorder_row-922.R Saving _problems/test_reorder_row-925.R Saving _problems/test_reorder_row-926.R Saving _problems/test_reorder_row-927.R Saving _problems/test_reorder_row-930.R Saving _problems/test_reorder_row-931.R Saving _problems/test_reorder_row-932.R Saving _problems/test_reorder_row-939.R Saving _problems/test_reorder_row-942.R Saving _problems/test_reorder_row-956.R Saving _problems/test_reorder_row-957.R Saving _problems/test_reorder_row-959.R Saving _problems/test_reorder_row-963.R Saving _problems/test_reorder_row-965.R Saving _problems/test_reorder_row-968.R Saving _problems/test_reorder_row-970.R Saving _problems/test_reorder_row-973.R Saving _problems/test_reorder_row-975.R Saving _problems/test_reorder_row-982.R Saving _problems/test_reorder_row-983.R Saving _problems/test_reorder_row-985.R Saving _problems/test_reorder_row-994.R Saving _problems/test_reorder_row-995.R Saving _problems/test_reorder_row-997.R Saving _problems/test_reorder_row-1001.R Saving _problems/test_reorder_row-1003.R Saving _problems/test_reorder_row-1006.R Saving _problems/test_reorder_row-1008.R Saving _problems/test_reorder_row-1011.R Saving _problems/test_reorder_row-1013.R Saving _problems/test_reorder_row-1020.R Saving _problems/test_reorder_row-1021.R Saving _problems/test_reorder_row-1023.R Saving _problems/test_reorder_row-1117.R Saving _problems/test_reorder_row-1120.R Saving _problems/test_reorder_row-1126.R Saving _problems/test_reorder_row-1128.R Saving _problems/test_reorder_row-1144.R Saving _problems/test_reorder_row-1147.R Saving _problems/test_reorder_row-1157.R Saving _problems/test_reorder_row-1160.R Saving _problems/test_reorder_row-1166.R Saving _problems/test_reorder_row-1168.R Saving _problems/test_reorder_row-1184.R Saving _problems/test_reorder_row-1187.R Saving _problems/test_reorder_row-1202.R Saving _problems/test_reorder_row-1203.R Saving _problems/test_reorder_row-1205.R Saving _problems/test_reorder_row-1209.R Saving _problems/test_reorder_row-1211.R Saving _problems/test_reorder_row-1214.R Saving _problems/test_reorder_row-1215.R Saving _problems/test_reorder_row-1220.R Saving _problems/test_reorder_row-1221.R Saving _problems/test_reorder_row-1227.R Saving _problems/test_reorder_row-1228.R Saving _problems/test_reorder_row-1230.R Saving _problems/test_reorder_row-1239.R Saving _problems/test_reorder_row-1240.R Saving _problems/test_reorder_row-1242.R Saving _problems/test_reorder_row-1246.R Saving _problems/test_reorder_row-1248.R Saving _problems/test_reorder_row-1251.R Saving _problems/test_reorder_row-1252.R Saving _problems/test_reorder_row-1256.R Saving _problems/test_reorder_row-1257.R Saving _problems/test_reorder_row-1264.R Saving _problems/test_reorder_row-1265.R Saving _problems/test_reorder_row-1267.R Saving _problems/test_reorder_row-1294.R Saving _problems/test_reorder_row-1295.R Saving _problems/test_reorder_row-1297.R Saving _problems/test_reorder_row-1301.R Saving _problems/test_reorder_row-1303.R Saving _problems/test_reorder_row-1306.R Saving _problems/test_reorder_row-1307.R Saving _problems/test_reorder_row-1311.R Saving _problems/test_reorder_row-1312.R Saving _problems/test_reorder_row-1320.R Saving _problems/test_reorder_row-1321.R Saving _problems/test_reorder_row-1323.R Saving _problems/test_reorder_row-1332.R Saving _problems/test_reorder_row-1333.R Saving _problems/test_reorder_row-1335.R Saving _problems/test_reorder_row-1337.R Saving _problems/test_reorder_row-1339.R Saving _problems/test_reorder_row-1341.R Saving _problems/test_reorder_row-1343.R Saving _problems/test_reorder_row-1350.R Saving _problems/test_reorder_row-1351.R Saving _problems/test_reorder_row-1353.R [ FAIL 132 | WARN 0 | SKIP 0 | PASS 3181 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_reorder_row.R:772:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc` to equal `orig$out_parlist$rowc[c(1, 3, 4, 2)]`. Differences: Names: 2 string mismatches ── Failure ('test_reorder_row.R:773:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc_cov[, 1]` to equal `orig$out_parlist$rowc_cov[c(1, 3, 4, 2), ]`. Differences: 2/4 mismatches (average diff: 0.0566) [2] 0.269 - 0.213 == 0.0566 [3] 0.213 - 0.269 == -0.0566 ── Failure ('test_reorder_row.R:775:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_proportions` to equal `orig$row_cluster_proportions[c(1, 3, 4, 2)]`. Differences: 2/4 mismatches (average diff: 0.0282) [2] 0.242 - 0.270 == -0.0282 [3] 0.270 - 0.242 == 0.0282 ── Failure ('test_reorder_row.R:786:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parvec` to equal `reconstruct_out_parvec`. Differences: 4/22 mismatches (average diff: 0.0878) [4] 0.212 - 0.331 == -0.1190 [5] 0.331 - 0.212 == 0.1190 [12] 0.269 - 0.213 == 0.0566 [13] 0.213 - 0.269 == -0.0566 ── Failure ('test_reorder_row.R:788:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_probs` to equal `orig$row_cluster_probs[, c(1, 3, 4, 2)]`. Differences: 60/120 mismatches (average diff: 0.0286) [31] 0.242 - 0.255 == -0.01352 [32] 0.242 - 0.263 == -0.02072 [33] 0.242 - 0.264 == -0.02226 [34] 0.241 - 0.248 == -0.00746 [35] 0.240 - 0.235 == 0.00541 [36] 0.243 - 0.273 == -0.03025 [37] 0.237 - 0.325 == -0.08766 [38] 0.240 - 0.243 == -0.00335 [39] 0.243 - 0.276 == -0.03226 ... ── Failure ('test_reorder_row.R:791:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("2", reord$row_clusters)` to equal `match("3", orig$row_clusters)`. Differences: 1/1 mismatches [1] NA - 7 == NA ── Failure ('test_reorder_row.R:792:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("3", reord$row_clusters)` to equal `match("4", orig$row_clusters)`. Differences: 1/1 mismatches [1] 7 - NA == NA ── Failure ('test_reorder_row.R:796:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[2]]` to equal `orig$row_cluster_members[[3]]`. Differences: Lengths differ: 0 is not 6 ── Failure ('test_reorder_row.R:797:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[3]]` to equal `orig$row_cluster_members[[4]]`. Differences: Lengths differ: 6 is not 0 ── Failure ('test_reorder_row.R:805:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc` to equal `orig$EMstatus$params_for_best_lli$rowc[c(1, 3, 4, 2)]`. Differences: 2/4 mismatches (average diff: 0.119) [2] 0.212 - 0.331 == -0.119 [3] 0.331 - 0.212 == 0.119 ── Failure ('test_reorder_row.R:806:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc_cov[, 1]` to equal `orig$EMstatus$params_for_best_lli$rowc_cov[c(1, 3, 4, 2), ]`. Differences: 2/4 mismatches (average diff: 0.0566) [2] 0.269 - 0.213 == 0.0566 [3] 0.213 - 0.269 == -0.0566 ── Failure ('test_reorder_row.R:808:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_every_iteration` to equal `...[]`. Differences: Attributes: < Component "dimnames": Component 2: 6 string mismatches > ── Failure ('test_reorder_row.R:822:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc` to equal `orig$out_parlist$rowc[c(1, 2, 4, 3)]`. Differences: Names: 2 string mismatches ── Failure ('test_reorder_row.R:823:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc_cov[, 1]` to equal `orig$out_parlist$rowc_cov[c(1, 2, 4, 3), ]`. Differences: 2/4 mismatches (average diff: 0.0566) [3] 0.213 - 0.269 == -0.0566 [4] 0.269 - 0.213 == 0.0566 ── Failure ('test_reorder_row.R:825:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_proportions` to equal `orig$row_cluster_proportions[c(1, 2, 4, 3)]`. Differences: 2/4 mismatches (average diff: 0.0282) [3] 0.270 - 0.242 == 0.0282 [4] 0.242 - 0.270 == -0.0282 ── Failure ('test_reorder_row.R:836:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parvec` to equal `reconstruct_out_parvec`. Differences: 4/22 mismatches (average diff: 0.0878) [5] 0.331 - 0.212 == 0.1190 [6] 0.212 - 0.331 == -0.1190 [13] 0.213 - 0.269 == -0.0566 [14] 0.269 - 0.213 == 0.0566 ── Failure ('test_reorder_row.R:838:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_probs` to equal `orig$row_cluster_probs[, c(1, 2, 4, 3)]`. Differences: 60/120 mismatches (average diff: 0.0286) [61] 0.255 - 0.242 == 0.01352 [62] 0.263 - 0.242 == 0.02072 [63] 0.264 - 0.242 == 0.02226 [64] 0.248 - 0.241 == 0.00746 [65] 0.235 - 0.240 == -0.00541 [66] 0.273 - 0.243 == 0.03025 [67] 0.325 - 0.237 == 0.08766 [68] 0.243 - 0.240 == 0.00335 [69] 0.276 - 0.243 == 0.03226 ... ── Failure ('test_reorder_row.R:842:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("3", reord$row_clusters)` to equal `match("4", orig$row_clusters)`. Differences: 1/1 mismatches [1] 7 - NA == NA ── Failure ('test_reorder_row.R:843:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("4", reord$row_clusters)` to equal `match("3", orig$row_clusters)`. Differences: 1/1 mismatches [1] NA - 7 == NA ── Failure ('test_reorder_row.R:847:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[3]]` to equal `orig$row_cluster_members[[4]]`. Differences: Lengths differ: 6 is not 0 ── Failure ('test_reorder_row.R:848:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[4]]` to equal `orig$row_cluster_members[[3]]`. Differences: Lengths differ: 0 is not 6 ── Failure ('test_reorder_row.R:855:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc` to equal `orig$EMstatus$params_for_best_lli$rowc[c(1, 2, 4, 3)]`. Differences: 2/4 mismatches (average diff: 0.119) [3] 0.331 - 0.212 == 0.119 [4] 0.212 - 0.331 == -0.119 ── Failure ('test_reorder_row.R:856:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc_cov[, 1]` to equal `orig$EMstatus$params_for_best_lli$rowc_cov[c(1, 2, 4, 3), ]`. Differences: 2/4 mismatches (average diff: 0.0566) [3] 0.213 - 0.269 == -0.0566 [4] 0.269 - 0.213 == 0.0566 ── Failure ('test_reorder_row.R:858:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_every_iteration` to equal `...[]`. Differences: Attributes: < Component "dimnames": Component 2: 6 string mismatches > ── Failure ('test_reorder_row.R:873:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc` to equal `orig$out_parlist$rowc[c(1, 3, 2, 4)]`. Differences: Names: 3 string mismatches ── Failure ('test_reorder_row.R:874:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc_col` to equal `orig$out_parlist$rowc_col[c(1, 3, 2, 4), ]`. Differences: 15/20 mismatches (average diff: 0.552) [2] -0.3903 - 0.3044 == -0.6947 [3] -0.3357 - -0.3903 == 0.0546 [4] 0.3044 - -0.3357 == 0.6401 [6] -0.1200 - 0.1042 == -0.2243 [7] -0.0986 - -0.1200 == 0.0214 [8] 0.1042 - -0.0986 == 0.2028 [10] 0.4790 - -0.5022 == 0.9812 [11] 0.6708 - 0.4790 == 0.1918 [12] -0.5022 - 0.6708 == -1.1730 ... ── Failure ('test_reorder_row.R:876:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_proportions` to equal `orig$row_cluster_proportions[c(1, 3, 2, 4)]`. Differences: 3/4 mismatches (average diff: 0.143) [2] 0.143 - 0.357 == -0.215 [3] 0.252 - 0.143 == 0.109 [4] 0.357 - 0.252 == 0.106 ── Failure ('test_reorder_row.R:880:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parvec` to equal `reconstruct_out_parvec`. Differences: 11/23 mismatches (average diff: 0.411) [4] -0.6771 - -0.0949 == -0.5822 [5] -0.3104 - -0.6771 == 0.3668 [6] -0.0949 - -0.3104 == 0.2155 [15] -0.3903 - 0.3044 == -0.6947 [16] -0.1200 - 0.1042 == -0.2243 [17] 0.4790 - -0.5022 == 0.9812 [18] 0.2049 - 0.3206 == -0.1157 [19] -0.3357 - -0.3903 == 0.0546 [20] -0.0986 - -0.1200 == 0.0214 ... ── Failure ('test_reorder_row.R:882:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_probs` to equal `orig$row_cluster_probs[, c(1, 3, 2, 4)]`. Differences: 90/120 mismatches (average diff: 0.174) [31] 0.0914 - 0.345 == -0.2537 [32] 0.1257 - 0.417 == -0.2917 [33] 0.1129 - 0.422 == -0.3091 [34] 0.1569 - 0.242 == -0.0851 [35] 0.2439 - 0.264 == -0.0204 [36] 0.1069 - 0.338 == -0.2307 [37] 0.0486 - 0.366 == -0.3172 [38] 0.1587 - 0.322 == -0.1634 [39] 0.1264 - 0.402 == -0.2754 ... ── Failure ('test_reorder_row.R:885:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("2", reord$row_clusters)` to equal `match("3", orig$row_clusters)`. Differences: 1/1 mismatches [1] NA - 1 == NA ── Failure ('test_reorder_row.R:886:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("3", reord$row_clusters)` to equal `match("2", orig$row_clusters)`. Differences: 1/1 mismatches [1] 4 - NA == NA ── Failure ('test_reorder_row.R:887:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("4", reord$row_clusters)` to equal `match("4", orig$row_clusters)`. Differences: 1/1 mismatches [1] 1 - 4 == -3 ── Failure ('test_reorder_row.R:890:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[2]]` to equal `orig$row_cluster_members[[3]]`. Differences: Lengths differ: 0 is not 23 ── Failure ('test_reorder_row.R:891:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[3]]` to equal `orig$row_cluster_members[[2]]`. Differences: Lengths differ: 7 is not 0 ── Failure ('test_reorder_row.R:892:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[4]]` to equal `orig$row_cluster_members[[4]]`. Differences: Lengths differ: 23 is not 7 ── Failure ('test_reorder_row.R:899:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc` to equal `orig$EMstatus$params_for_best_lli$rowc[c(1, 3, 2, 4)]`. Differences: 3/4 mismatches (average diff: 0.388) [2] -0.6771 - -0.0949 == -0.582 [3] -0.3104 - -0.6771 == 0.367 [4] -0.0949 - -0.3104 == 0.215 ── Failure ('test_reorder_row.R:902:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_every_iteration` to equal `...[]`. Differences: Attributes: < Component "dimnames": Component 2: 21 string mismatches > ── Failure ('test_reorder_row.R:912:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc` to equal `orig$out_parlist$rowc[c(1, 4, 2, 3)]`. Differences: Names: 3 string mismatches ── Failure ('test_reorder_row.R:913:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc_col` to equal `orig$out_parlist$rowc_col[c(1, 4, 2, 3), ]`. Differences: 15/20 mismatches (average diff: 0.552) [2] 0.3044 - -0.3357 == 0.6401 [3] -0.3357 - -0.3903 == 0.0546 [4] -0.3903 - 0.3044 == -0.6947 [6] 0.1042 - -0.0986 == 0.2028 [7] -0.0986 - -0.1200 == 0.0214 [8] -0.1200 - 0.1042 == -0.2243 [10] -0.5022 - 0.6708 == -1.1730 [11] 0.6708 - 0.4790 == 0.1918 [12] 0.4790 - -0.5022 == 0.9812 ... ── Failure ('test_reorder_row.R:915:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_proportions` to equal `orig$row_cluster_proportions[c(1, 4, 2, 3)]`. Differences: 3/4 mismatches (average diff: 0.143) [2] 0.357 - 0.252 == 0.106 [3] 0.252 - 0.143 == 0.109 [4] 0.143 - 0.357 == -0.215 ── Failure ('test_reorder_row.R:920:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parvec` to equal `reconstruct_out_parvec`. Differences: 11/23 mismatches (average diff: 0.519) [4] -0.0949 - -0.3104 == 0.2155 [5] -0.3104 - -0.6771 == 0.3668 [6] -0.6771 - -0.0949 == -0.5822 [15] 0.3044 - -0.3357 == 0.6401 [16] 0.1042 - -0.0986 == 0.2028 [17] -0.5022 - 0.6708 == -1.1730 [18] 0.3206 - -0.8699 == 1.1905 [19] -0.3357 - -0.3903 == 0.0546 [20] -0.0986 - -0.1200 == 0.0214 ... ── Failure ('test_reorder_row.R:922:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_probs` to equal `orig$row_cluster_probs[, c(1, 4, 2, 3)]`. Differences: 90/120 mismatches (average diff: 0.174) [31] 0.345 - 0.317 == 0.0282 [32] 0.417 - 0.165 == 0.2520 [33] 0.422 - 0.163 == 0.2590 [34] 0.242 - 0.447 == -0.2049 [35] 0.264 - 0.333 == -0.0683 [36] 0.338 - 0.322 == 0.0152 [37] 0.366 - 0.301 == 0.0653 [38] 0.322 - 0.306 == 0.0164 [39] 0.402 - 0.193 == 0.2092 ... ── Failure ('test_reorder_row.R:925:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("2", reord$row_clusters)` to equal `match("4", orig$row_clusters)`. Differences: 1/1 mismatches [1] 1 - 4 == -3 ── Failure ('test_reorder_row.R:926:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("3", reord$row_clusters)` to equal `match("2", orig$row_clusters)`. Differences: 1/1 mismatches [1] 4 - NA == NA ── Failure ('test_reorder_row.R:927:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("4", reord$row_clusters)` to equal `match("3", orig$row_clusters)`. Differences: 1/1 mismatches [1] NA - 1 == NA ── Failure ('test_reorder_row.R:930:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[2]]` to equal `orig$row_cluster_members[[4]]`. Differences: Lengths differ: 23 is not 7 ── Failure ('test_reorder_row.R:931:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[3]]` to equal `orig$row_cluster_members[[2]]`. Differences: Lengths differ: 7 is not 0 ── Failure ('test_reorder_row.R:932:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[4]]` to equal `orig$row_cluster_members[[3]]`. Differences: Lengths differ: 0 is not 23 ── Failure ('test_reorder_row.R:939:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc` to equal `orig$EMstatus$params_for_best_lli$rowc[c(1, 4, 2, 3)]`. Differences: 3/4 mismatches (average diff: 0.388) [2] -0.0949 - -0.3104 == 0.215 [3] -0.3104 - -0.6771 == 0.367 [4] -0.6771 - -0.0949 == -0.582 ── Failure ('test_reorder_row.R:942:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_every_iteration` to equal `...[]`. Differences: Attributes: < Component "dimnames": Component 2: 21 string mismatches > ── Failure ('test_reorder_row.R:956:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc` to equal `orig$out_parlist$rowc[c(1, 3, 4, 2)]`. Differences: Names: 3 string mismatches ── Failure ('test_reorder_row.R:957:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc_cov[, 1]` to equal `orig$out_parlist$rowc_cov[c(1, 3, 4, 2), ]`. Differences: 3/4 mismatches (average diff: 0.0452) [2] -0.239 - -0.171 == -0.06787 [3] -0.173 - -0.239 == 0.06554 [4] -0.171 - -0.173 == 0.00233 ── Failure ('test_reorder_row.R:959:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_proportions` to equal `orig$row_cluster_proportions[c(1, 3, 4, 2)]`. Differences: 3/4 mismatches (average diff: 0.0525) [2] 0.221 - 0.223 == -0.00122 [3] 0.144 - 0.221 == -0.07746 [4] 0.223 - 0.144 == 0.07868 ── Failure ('test_reorder_row.R:963:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parvec` to equal `reconstruct_out_parvec`. Differences: 6/11 mismatches (average diff: 0.1) [4] 0.372 - 0.605 == -0.23308 [5] 0.600 - 0.372 == 0.22780 [6] 0.605 - 0.600 == 0.00528 [8] -0.239 - -0.171 == -0.06787 [9] -0.173 - -0.239 == 0.06554 [10] -0.171 - -0.173 == 0.00233 ── Failure ('test_reorder_row.R:965:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_probs` to equal `orig$row_cluster_probs[, c(1, 3, 4, 2)]`. Differences: 90/120 mismatches (average diff: 0.0643) [31] 0.228 - 0.223 == 0.00477 [32] 0.229 - 0.227 == 0.00231 [33] 0.223 - 0.206 == 0.01776 [34] 0.217 - 0.185 == 0.03144 [35] 0.207 - 0.163 == 0.04446 [36] 0.220 - 0.194 == 0.02580 [37] 0.228 - 0.357 == -0.12965 [38] 0.207 - 0.163 == 0.04418 [39] 0.232 - 0.240 == -0.00787 ... ── Failure ('test_reorder_row.R:968:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("2", reord$row_clusters)` to equal `match("3", orig$row_clusters)`. Differences: 1/1 mismatches [1] NA - 7 == NA ── Failure ('test_reorder_row.R:970:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("4", reord$row_clusters)` to equal `match("2", orig$row_clusters)`. Differences: 1/1 mismatches [1] 7 - NA == NA ── Failure ('test_reorder_row.R:973:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[2]]` to equal `orig$row_cluster_members[[3]]`. Differences: Lengths differ: 0 is not 5 ── Failure ('test_reorder_row.R:975:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[4]]` to equal `orig$row_cluster_members[[2]]`. Differences: Lengths differ: 5 is not 0 ── Failure ('test_reorder_row.R:982:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc` to equal `orig$EMstatus$params_for_best_lli$rowc[c(1, 3, 4, 2)]`. Differences: 3/4 mismatches (average diff: 0.155) [2] 0.372 - 0.605 == -0.23308 [3] 0.600 - 0.372 == 0.22780 [4] 0.605 - 0.600 == 0.00528 ── Failure ('test_reorder_row.R:983:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc_cov[, 1]` to equal `orig$EMstatus$params_for_best_lli$rowc_cov[c(1, 3, 4, 2), ]`. Differences: 3/4 mismatches (average diff: 0.0452) [2] -0.239 - -0.171 == -0.06787 [3] -0.173 - -0.239 == 0.06554 [4] -0.171 - -0.173 == 0.00233 ── Failure ('test_reorder_row.R:985:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_every_iteration` to equal `...[]`. Differences: Attributes: < Component "dimnames": Component 2: 9 string mismatches > ── Failure ('test_reorder_row.R:994:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc` to equal `orig$out_parlist$rowc[c(1, 2, 4, 3)]`. Differences: Names: 3 string mismatches ── Failure ('test_reorder_row.R:995:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc_cov[, 1]` to equal `orig$out_parlist$rowc_cov[c(1, 2, 4, 3), ]`. Differences: 3/4 mismatches (average diff: 0.0452) [2] -0.171 - -0.173 == 0.00233 [3] -0.173 - -0.239 == 0.06554 [4] -0.239 - -0.171 == -0.06787 ── Failure ('test_reorder_row.R:997:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_proportions` to equal `orig$row_cluster_proportions[c(1, 2, 4, 3)]`. Differences: 3/4 mismatches (average diff: 0.0525) [2] 0.223 - 0.144 == 0.07868 [3] 0.144 - 0.221 == -0.07746 [4] 0.221 - 0.223 == -0.00122 ── Failure ('test_reorder_row.R:1001:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parvec` to equal `reconstruct_out_parvec`. Differences: 6/11 mismatches (average diff: 0.1) [4] 0.605 - 0.600 == 0.00528 [5] 0.600 - 0.372 == 0.22780 [6] 0.372 - 0.605 == -0.23308 [8] -0.171 - -0.173 == 0.00233 [9] -0.173 - -0.239 == 0.06554 [10] -0.239 - -0.171 == -0.06787 ── Failure ('test_reorder_row.R:1003:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_probs` to equal `orig$row_cluster_probs[, c(1, 2, 4, 3)]`. Differences: 90/120 mismatches (average diff: 0.0643) [31] 0.223 - 0.144 == 0.0786 [32] 0.227 - 0.147 == 0.0801 [33] 0.206 - 0.133 == 0.0724 [34] 0.185 - 0.120 == 0.0650 [35] 0.163 - 0.106 == 0.0569 [36] 0.194 - 0.126 == 0.0682 [37] 0.357 - 0.229 == 0.1284 [38] 0.163 - 0.106 == 0.0569 [39] 0.240 - 0.155 == 0.0847 ... ── Failure ('test_reorder_row.R:1006:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("2", reord$row_clusters)` to equal `match("2", orig$row_clusters)`. Differences: 1/1 mismatches [1] 7 - NA == NA ── Failure ('test_reorder_row.R:1008:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("4", reord$row_clusters)` to equal `match("3", orig$row_clusters)`. Differences: 1/1 mismatches [1] NA - 7 == NA ── Failure ('test_reorder_row.R:1011:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[2]]` to equal `orig$row_cluster_members[[2]]`. Differences: Lengths differ: 5 is not 0 ── Failure ('test_reorder_row.R:1013:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[4]]` to equal `orig$row_cluster_members[[3]]`. Differences: Lengths differ: 0 is not 5 ── Failure ('test_reorder_row.R:1020:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc` to equal `orig$EMstatus$params_for_best_lli$rowc[c(1, 2, 4, 3)]`. Differences: 3/4 mismatches (average diff: 0.155) [2] 0.605 - 0.600 == 0.00528 [3] 0.600 - 0.372 == 0.22780 [4] 0.372 - 0.605 == -0.23308 ── Failure ('test_reorder_row.R:1021:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc_cov[, 1]` to equal `orig$EMstatus$params_for_best_lli$rowc_cov[c(1, 2, 4, 3), ]`. Differences: 3/4 mismatches (average diff: 0.0452) [2] -0.171 - -0.173 == 0.00233 [3] -0.173 - -0.239 == 0.06554 [4] -0.239 - -0.171 == -0.06787 ── Failure ('test_reorder_row.R:1023:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_every_iteration` to equal `...[]`. Differences: Attributes: < Component "dimnames": Component 2: 9 string mismatches > ── Failure ('test_reorder_row.R:1117:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc` to equal `orig$out_parlist$rowc[c(1, 2, 4, 3)]`. Differences: Names: 2 string mismatches ── Failure ('test_reorder_row.R:1120:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_proportions` to equal `orig$row_cluster_proportions[c(1, 2, 4, 3)]`. Differences: 2/4 mismatches (average diff: 0.293) [2] 0.0384 - 0.3313 == -0.293 [4] 0.3313 - 0.0384 == 0.293 ── Failure ('test_reorder_row.R:1126:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parvec` to equal `reconstruct_out_parvec`. Differences: 6/22 mismatches (average diff: 0.206) [3] -0.4085 - 0.0373 == -0.4458 [5] 0.0373 - -0.4085 == 0.4458 [14] 0.0568 - 0.1670 == -0.1102 [15] 0.0354 - 0.0570 == -0.0216 [16] -0.1175 - -0.3131 == 0.1956 [17] 0.2332 - 0.2493 == -0.0161 ── Failure ('test_reorder_row.R:1128:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_probs` to equal `orig$row_cluster_probs[, c(1, 2, 4, 3)]`. Differences: 60/120 mismatches (average diff: 0.293) [31] 0.0301 - 0.321 == -0.291 [32] 0.0354 - 0.371 == -0.336 [33] 0.0327 - 0.377 == -0.345 [34] 0.0342 - 0.249 == -0.215 [35] 0.0605 - 0.265 == -0.205 [36] 0.0292 - 0.327 == -0.297 [37] 0.0123 - 0.352 == -0.339 [38] 0.0406 - 0.307 == -0.266 [39] 0.0281 - 0.368 == -0.340 ... ── Failure ('test_reorder_row.R:1144:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc` to equal `orig$EMstatus$params_for_best_lli$rowc[c(1, 2, 4, 3)]`. Differences: 2/4 mismatches (average diff: 0.446) [2] -0.4085 - 0.0373 == -0.446 [4] 0.0373 - -0.4085 == 0.446 ── Failure ('test_reorder_row.R:1147:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_every_iteration` to equal `...[]`. Differences: Attributes: < Component "dimnames": Component 2: 14 string mismatches > ── Failure ('test_reorder_row.R:1157:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc` to equal `orig$out_parlist$rowc[c(1, 3, 4, 2)]`. Differences: Names: 2 string mismatches ── Failure ('test_reorder_row.R:1160:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_proportions` to equal `orig$row_cluster_proportions[c(1, 3, 4, 2)]`. Differences: 2/4 mismatches (average diff: 0.293) [2] 0.3313 - 0.0384 == 0.293 [4] 0.0384 - 0.3313 == -0.293 ── Failure ('test_reorder_row.R:1166:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parvec` to equal `reconstruct_out_parvec`. Differences: 6/22 mismatches (average diff: 0.206) [3] 0.0373 - -0.4085 == 0.4458 [5] -0.4085 - 0.0373 == -0.4458 [14] 0.1670 - 0.0568 == 0.1102 [15] 0.0570 - 0.0354 == 0.0216 [16] -0.3131 - -0.1175 == -0.1956 [17] 0.2493 - 0.2332 == 0.0161 ── Failure ('test_reorder_row.R:1168:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_probs` to equal `orig$row_cluster_probs[, c(1, 3, 4, 2)]`. Differences: 60/120 mismatches (average diff: 0.293) [31] 0.321 - 0.0301 == 0.291 [32] 0.371 - 0.0354 == 0.336 [33] 0.377 - 0.0327 == 0.345 [34] 0.249 - 0.0342 == 0.215 [35] 0.265 - 0.0605 == 0.205 [36] 0.327 - 0.0292 == 0.297 [37] 0.352 - 0.0123 == 0.339 [38] 0.307 - 0.0406 == 0.266 [39] 0.368 - 0.0281 == 0.340 ... ── Failure ('test_reorder_row.R:1184:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc` to equal `orig$EMstatus$params_for_best_lli$rowc[c(1, 3, 4, 2)]`. Differences: 2/4 mismatches (average diff: 0.446) [2] 0.0373 - -0.4085 == 0.446 [4] -0.4085 - 0.0373 == -0.446 ── Failure ('test_reorder_row.R:1187:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_every_iteration` to equal `...[]`. Differences: Attributes: < Component "dimnames": Component 2: 14 string mismatches > ── Failure ('test_reorder_row.R:1202:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc` to equal `orig$out_parlist$rowc[c(1, 4, 2, 3)]`. Differences: Names: 2 string mismatches ── Failure ('test_reorder_row.R:1203:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc_cov[, 1]` to equal `orig$out_parlist$rowc_cov[c(1, 4, 2, 3), ]`. Differences: 2/4 mismatches (average diff: 0.00791) [3] -0.125 - -0.133 == 0.00791 [4] -0.133 - -0.125 == -0.00791 ── Failure ('test_reorder_row.R:1205:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_proportions` to equal `orig$row_cluster_proportions[c(1, 4, 2, 3)]`. Differences: 2/4 mismatches (average diff: 0.0924) [3] 0.274 - 0.181 == 0.0924 [4] 0.181 - 0.274 == -0.0924 ── Failure ('test_reorder_row.R:1209:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parvec` to equal `reconstruct_out_parvec`. Differences: 4/10 mismatches (average diff: 0.0278) [4] 0.410 - 0.458 == -0.04779 [5] 0.458 - 0.410 == 0.04779 [8] -0.125 - -0.133 == 0.00791 [9] -0.133 - -0.125 == -0.00791 ── Failure ('test_reorder_row.R:1211:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_probs` to equal `orig$row_cluster_probs[, c(1, 4, 2, 3)]`. Differences: 60/120 mismatches (average diff: 0.0924) [61] 0.284 - 0.183 == 0.1004 [62] 0.277 - 0.182 == 0.0948 [63] 0.281 - 0.183 == 0.0977 [64] 0.250 - 0.159 == 0.0906 [65] 0.205 - 0.128 == 0.0766 [66] 0.275 - 0.181 == 0.0945 [67] 0.380 - 0.278 == 0.1018 [68] 0.252 - 0.159 == 0.0925 [69] 0.303 - 0.205 == 0.0981 ... ── Failure ('test_reorder_row.R:1214:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("2", reord$row_clusters)` to equal `match("3", orig$row_clusters)`. Differences: 1/1 mismatches [1] NA - 7 == NA ── Failure ('test_reorder_row.R:1215:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("3", reord$row_clusters)` to equal `match("4", orig$row_clusters)`. Differences: 1/1 mismatches [1] 7 - NA == NA ── Failure ('test_reorder_row.R:1220:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[3]]` to equal `orig$row_cluster_members[[2]]`. Differences: Lengths differ: 9 is not 0 ── Failure ('test_reorder_row.R:1221:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[4]]` to equal `orig$row_cluster_members[[3]]`. Differences: Lengths differ: 0 is not 9 ── Failure ('test_reorder_row.R:1227:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc` to equal `orig$EMstatus$params_for_best_lli$rowc[c(1, 4, 2, 3)]`. Differences: 2/4 mismatches (average diff: 0.0478) [3] 0.410 - 0.458 == -0.0478 [4] 0.458 - 0.410 == 0.0478 ── Failure ('test_reorder_row.R:1228:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc_cov[, 1]` to equal `orig$EMstatus$params_for_best_lli$rowc_cov[c(1, 4, 2, 3), ]`. Differences: 2/4 mismatches (average diff: 0.00791) [3] -0.125 - -0.133 == 0.00791 [4] -0.133 - -0.125 == -0.00791 ── Failure ('test_reorder_row.R:1230:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_every_iteration` to equal `...[]`. Differences: Attributes: < Component "dimnames": Component 2: 6 string mismatches > ── Failure ('test_reorder_row.R:1239:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc` to equal `orig$out_parlist$rowc[c(1, 3, 2, 4)]`. Differences: Names: 2 string mismatches ── Failure ('test_reorder_row.R:1240:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc_cov[, 1]` to equal `orig$out_parlist$rowc_cov[c(1, 3, 2, 4), ]`. Differences: 2/4 mismatches (average diff: 0.00791) [2] -0.133 - -0.125 == -0.00791 [3] -0.125 - -0.133 == 0.00791 ── Failure ('test_reorder_row.R:1242:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_proportions` to equal `orig$row_cluster_proportions[c(1, 3, 2, 4)]`. Differences: 2/4 mismatches (average diff: 0.0924) [2] 0.181 - 0.274 == -0.0924 [3] 0.274 - 0.181 == 0.0924 ── Failure ('test_reorder_row.R:1246:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parvec` to equal `reconstruct_out_parvec`. Differences: 4/10 mismatches (average diff: 0.0278) [3] 0.458 - 0.410 == 0.04779 [4] 0.410 - 0.458 == -0.04779 [7] -0.133 - -0.125 == -0.00791 [8] -0.125 - -0.133 == 0.00791 ── Failure ('test_reorder_row.R:1248:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_probs` to equal `orig$row_cluster_probs[, c(1, 3, 2, 4)]`. Differences: 60/120 mismatches (average diff: 0.0924) [31] 0.183 - 0.284 == -0.1004 [32] 0.182 - 0.277 == -0.0948 [33] 0.183 - 0.281 == -0.0977 [34] 0.159 - 0.250 == -0.0906 [35] 0.128 - 0.205 == -0.0766 [36] 0.181 - 0.275 == -0.0945 [37] 0.278 - 0.380 == -0.1018 [38] 0.159 - 0.252 == -0.0925 [39] 0.205 - 0.303 == -0.0981 ... ── Failure ('test_reorder_row.R:1251:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("2", reord$row_clusters)` to equal `match("3", orig$row_clusters)`. Differences: 1/1 mismatches [1] NA - 7 == NA ── Failure ('test_reorder_row.R:1252:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("3", reord$row_clusters)` to equal `match("4", orig$row_clusters)`. Differences: 1/1 mismatches [1] 7 - NA == NA ── Failure ('test_reorder_row.R:1256:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[2]]` to equal `orig$row_cluster_members[[3]]`. Differences: Lengths differ: 0 is not 9 ── Failure ('test_reorder_row.R:1257:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[3]]` to equal `orig$row_cluster_members[[2]]`. Differences: Lengths differ: 9 is not 0 ── Failure ('test_reorder_row.R:1264:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc` to equal `orig$EMstatus$params_for_best_lli$rowc[c(1, 3, 2, 4)]`. Differences: 2/4 mismatches (average diff: 0.0478) [2] 0.458 - 0.410 == 0.0478 [3] 0.410 - 0.458 == -0.0478 ── Failure ('test_reorder_row.R:1265:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc_cov[, 1]` to equal `orig$EMstatus$params_for_best_lli$rowc_cov[c(1, 3, 2, 4), ]`. Differences: 2/4 mismatches (average diff: 0.00791) [2] -0.133 - -0.125 == -0.00791 [3] -0.125 - -0.133 == 0.00791 ── Failure ('test_reorder_row.R:1267:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_every_iteration` to equal `...[]`. Differences: Attributes: < Component "dimnames": Component 2: 6 string mismatches > ── Failure ('test_reorder_row.R:1294:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc` to equal `orig$out_parlist$rowc[c(1, 4, 3, 2)]`. Differences: Names: 2 string mismatches ── Failure ('test_reorder_row.R:1295:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc_cov[, 1]` to equal `orig$out_parlist$rowc_cov[c(1, 4, 3, 2), ]`. Differences: 2/4 mismatches (average diff: 0.0116) [2] 0.147 - 0.136 == 0.0116 [3] 0.136 - 0.147 == -0.0116 ── Failure ('test_reorder_row.R:1297:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_proportions` to equal `orig$row_cluster_proportions[c(1, 4, 3, 2)]`. Differences: 2/4 mismatches (average diff: 0.233) [2] 0.516 - 0.283 == 0.233 [3] 0.283 - 0.516 == -0.233 ── Failure ('test_reorder_row.R:1301:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parvec` to equal `reconstruct_out_parvec`. Differences: 4/20 mismatches (average diff: 0.0296) [2] -0.456 - -0.408 == -0.0476 [3] -0.408 - -0.456 == 0.0476 [10] 0.147 - 0.136 == 0.0116 [11] 0.136 - 0.147 == -0.0116 ── Failure ('test_reorder_row.R:1303:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_probs` to equal `orig$row_cluster_probs[, c(1, 4, 3, 2)]`. Differences: 60/120 mismatches (average diff: 0.233) [31] 0.537 - 0.283 == 0.254 [32] 0.491 - 0.284 == 0.207 [33] 0.518 - 0.283 == 0.235 [34] 0.510 - 0.283 == 0.227 [35] 0.505 - 0.283 == 0.222 [36] 0.534 - 0.282 == 0.252 [37] 0.532 - 0.284 == 0.248 [38] 0.530 - 0.283 == 0.248 [39] 0.457 - 0.277 == 0.180 ... ── Failure ('test_reorder_row.R:1306:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("2", reord$row_clusters)` to equal `match("4", orig$row_clusters)`. Differences: 1/1 mismatches [1] 1 - NA == NA ── Failure ('test_reorder_row.R:1307:5'): reordering row clustering results with other constraint produces correct results. ── Expected `match("3", reord$row_clusters)` to equal `match("3", orig$row_clusters)`. Differences: 1/1 mismatches [1] NA - 1 == NA ── Failure ('test_reorder_row.R:1311:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[2]]` to equal `orig$row_cluster_members[[4]]`. Differences: Lengths differ: 30 is not 0 ── Failure ('test_reorder_row.R:1312:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members[[3]]` to equal `orig$row_cluster_members[[3]]`. Differences: Lengths differ: 0 is not 30 ── Failure ('test_reorder_row.R:1320:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc` to equal `orig$EMstatus$params_for_best_lli$rowc[c(1, 4, 3, 2)]`. Differences: 2/4 mismatches (average diff: 0.0476) [2] -0.456 - -0.408 == -0.0476 [3] -0.408 - -0.456 == 0.0476 ── Failure ('test_reorder_row.R:1321:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc_cov[, 1]` to equal `orig$EMstatus$params_for_best_lli$rowc_cov[c(1, 4, 3, 2), ]`. Differences: 2/4 mismatches (average diff: 0.0116) [2] 0.147 - 0.136 == 0.0116 [3] 0.136 - 0.147 == -0.0116 ── Failure ('test_reorder_row.R:1323:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_every_iteration` to equal `...[]`. Differences: Attributes: < Component "dimnames": Component 2: 6 string mismatches > ── Failure ('test_reorder_row.R:1332:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc` to equal `orig$out_parlist$rowc`. Differences: Names: 2 string mismatches ── Failure ('test_reorder_row.R:1333:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parlist$rowc_cov` to equal `orig$out_parlist$rowc_cov`. Differences: 2/4 mismatches (average diff: 0.0116) [3] 0.136 - 0.147 == -0.0116 [4] 0.147 - 0.136 == 0.0116 ── Failure ('test_reorder_row.R:1335:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_proportions` to equal `orig$row_cluster_proportions`. Differences: 2/4 mismatches (average diff: 0.233) [3] 0.283 - 0.516 == -0.233 [4] 0.516 - 0.283 == 0.233 ── Failure ('test_reorder_row.R:1337:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$out_parvec` to equal `orig$out_parvec`. Differences: 4/20 mismatches (average diff: 0.0296) [3] -0.408 - -0.456 == 0.0476 [4] -0.456 - -0.408 == -0.0476 [11] 0.136 - 0.147 == -0.0116 [12] 0.147 - 0.136 == 0.0116 ── Failure ('test_reorder_row.R:1339:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_probs` to equal `orig$row_cluster_probs`. Differences: 60/120 mismatches (average diff: 0.233) [61] 0.283 - 0.537 == -0.254 [62] 0.284 - 0.491 == -0.207 [63] 0.283 - 0.518 == -0.235 [64] 0.283 - 0.510 == -0.227 [65] 0.283 - 0.505 == -0.222 [66] 0.282 - 0.534 == -0.252 [67] 0.284 - 0.532 == -0.248 [68] 0.283 - 0.530 == -0.248 [69] 0.277 - 0.457 == -0.180 ... ── Failure ('test_reorder_row.R:1341:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_clusters` to equal `orig$row_clusters`. Differences: 30/30 mismatches (average diff: 1) [1] 4 - 3 == 1 [2] 4 - 3 == 1 [3] 4 - 3 == 1 [4] 4 - 3 == 1 [5] 4 - 3 == 1 [6] 4 - 3 == 1 [7] 4 - 3 == 1 [8] 4 - 3 == 1 [9] 4 - 3 == 1 ... ── Failure ('test_reorder_row.R:1343:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$row_cluster_members` to equal `orig$row_cluster_members`. Differences: Component 3: Numeric: lengths (0, 30) differ Component 4: Numeric: lengths (30, 0) differ ── Failure ('test_reorder_row.R:1350:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc` to equal `orig$EMstatus$params_for_best_lli$rowc`. Differences: 2/4 mismatches (average diff: 0.0476) [3] -0.408 - -0.456 == 0.0476 [4] -0.456 - -0.408 == -0.0476 ── Failure ('test_reorder_row.R:1351:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_for_best_lli$rowc_cov` to equal `orig$EMstatus$params_for_best_lli$rowc_cov`. Differences: 2/4 mismatches (average diff: 0.0116) [3] 0.136 - 0.147 == -0.0116 [4] 0.147 - 0.136 == 0.0116 ── Failure ('test_reorder_row.R:1353:5'): reordering row clustering results with other constraint produces correct results. ── Expected `reord$EMstatus$params_every_iteration` to equal `orig$EMstatus$params_every_iteration`. Differences: Attributes: < Component "dimnames": Component 2: 6 string mismatches > [ FAIL 132 | WARN 0 | SKIP 0 | PASS 3181 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [37s/38s] OK * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/Users/ripley/R/packages/tests-devel/clustord.Rcheck/00check.log’ for details. 139.22 real 124.62 user 11.55 sys