* using log directory ‘/Users/ripley/R/packages/tests-devel/TriLLIEM.Rcheck’ * using R Under development (unstable) (2026-03-05 r89538) * using platform: aarch64-apple-darwin25.3.0 * R was compiled by Apple clang version 21.0.0 (clang-2100.0.121.2) GNU Fortran (GCC) 14.2.0 * running under: macOS Tahoe 26.3.1 * using session charset: UTF-8 * current time: 2026-03-05 10:46:42 UTC * using option ‘--no-stop-on-test-error’ * checking for file ‘TriLLIEM/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘TriLLIEM’ version ‘0.1.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘TriLLIEM’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ ERROR Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(TriLLIEM) > > test_check("TriLLIEM") Saving _problems/test-fullview-3.R Saving _problems/test-simulate-3.R [ FAIL 2 | WARN 0 | SKIP 10 | PASS 0 ] ══ Skipped tests (10) ══════════════════════════════════════════════════════════ • On CRAN (10): 'test-TriLLIEM.R:1:1', 'test-TriLLIEM.R:6:1', 'test-anova.TriLLIEM.R:1:1', 'test-anova.TriLLIEM.R:7:1', 'test-fullview.R:6:1', 'test-simulate.R:6:1', 'test-simulate.R:18:1', 'test-summary.TriLLIEM.R:1:1', 'test-summary.TriLLIEM.R:6:1', 'test-summary.TriLLIEM.R:36:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-fullview.R:3:3'): expected example_dat4R ───────────────────── Expected `fullview(simulateData())` to be identical to `fullview(example_dat4R)`. Differences: actual$prMF | expected$prMF [1] 0.240100000000000036 - 0.240099999999999980 [1] [2] 0.205800000000000011 - 0.205799999999999983 [2] [3] 0.205800000000000011 - 0.205799999999999983 [3] [4] 0.205800000000000011 - 0.205799999999999983 [4] [5] 0.205800000000000011 - 0.205799999999999983 [5] [6] 0.044100000000000000 | 0.044100000000000000 [6] [7] 0.044100000000000000 | 0.044100000000000000 [7] [8] 0.176399999999999973 | 0.176399999999999973 [8] actual$prMFCOrg | expected$prMFCOrg [1] 0.240100000000000036 - 0.240099999999999980 [1] [2] 0.102900000000000005 - 0.102899999999999991 [2] [3] 0.102900000000000005 - 0.102899999999999991 [3] [4] 0.102900000000000005 - 0.102899999999999991 [4] [5] 0.102900000000000005 - 0.102899999999999991 [5] [6] 0.044100000000000000 | 0.044100000000000000 [6] [7] 0.044100000000000000 | 0.044100000000000000 [7] [8] 0.044099999999999993 | 0.044099999999999993 [8] actual$PrCMFEgivenD | expected$PrCMFEgivenD [1] 0.2400999999999999246 - 0.2401000000000000079 [1] [2] 0.1028999999999999637 - 0.1029000000000000054 [2] [3] 0.1028999999999999637 - 0.1029000000000000054 [3] [4] 0.1028999999999999637 - 0.1029000000000000054 [4] [5] 0.1028999999999999637 - 0.1029000000000000054 [5] [6] 0.0440999999999999795 - 0.0441000000000000072 [6] [7] 0.0440999999999999795 - 0.0441000000000000072 [7] [8] 0.0440999999999999726 - 0.0441000000000000003 [8] [9] 0.0440999999999999726 - 0.0441000000000000003 [9] [10] 0.0440999999999999726 - 0.0441000000000000003 [10] ... ... ... and 6 more ... ── Failure ('test-simulate.R:3:3'): expected example_dat4R ───────────────────── Expected `simulateData()` to be identical to `example_dat4R`. Differences: attr(actual, 'ALL')$prMF | attr(expected, 'ALL')$prMF [1] 0.240100000000000036 - 0.240099999999999980 [1] [2] 0.205800000000000011 - 0.205799999999999983 [2] [3] 0.205800000000000011 - 0.205799999999999983 [3] [4] 0.205800000000000011 - 0.205799999999999983 [4] [5] 0.205800000000000011 - 0.205799999999999983 [5] [6] 0.044100000000000000 | 0.044100000000000000 [6] [7] 0.044100000000000000 | 0.044100000000000000 [7] [8] 0.176399999999999973 | 0.176399999999999973 [8] attr(actual, 'ALL')$prMFCOrg | attr(expected, 'ALL')$prMFCOrg [1] 0.240100000000000036 - 0.240099999999999980 [1] [2] 0.102900000000000005 - 0.102899999999999991 [2] [3] 0.102900000000000005 - 0.102899999999999991 [3] [4] 0.102900000000000005 - 0.102899999999999991 [4] [5] 0.102900000000000005 - 0.102899999999999991 [5] [6] 0.044100000000000000 | 0.044100000000000000 [6] [7] 0.044100000000000000 | 0.044100000000000000 [7] [8] 0.044099999999999993 | 0.044099999999999993 [8] attr(actual, 'ALL')$PrCMFEgivenD vs attr(expected, 'ALL')$PrCMFEgivenD - 0.2400999999999999246 + 0.2401000000000000079 - 0.1028999999999999637 + 0.1029000000000000054 - 0.1028999999999999637 + 0.1029000000000000054 - 0.1028999999999999637 + 0.1029000000000000054 - 0.1028999999999999637 + 0.1029000000000000054 - 0.0440999999999999795 + 0.0441000000000000072 - 0.0440999999999999795 + 0.0441000000000000072 - 0.0440999999999999726 + 0.0441000000000000003 - 0.0440999999999999726 + 0.0441000000000000003 - 0.0440999999999999726 + 0.0441000000000000003 and 6 more ... [ FAIL 2 | WARN 0 | SKIP 10 | PASS 0 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/Users/ripley/R/packages/tests-devel/TriLLIEM.Rcheck/00check.log’ for details. 32.84 real 21.23 user 8.00 sys