* using log directory ‘/Users/ripley/R/packages/tests-devel/Epoch.Rcheck’ * using R Under development (unstable) (2026-06-06 r90114) * using platform: aarch64-apple-darwin25.5.0 * R was compiled by Apple clang version 21.0.0 (clang-2100.1.1.101) GNU Fortran (GCC) 14.2.0 * running under: macOS Tahoe 26.5.1 * using session charset: UTF-8 * current time: 2026-06-07 06:19:37 UTC * using option ‘--no-stop-on-test-error’ * checking for file ‘Epoch/DESCRIPTION’ ... OK * this is package ‘Epoch’ version ‘1.0.7’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘Epoch’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ [2s/182s] [2s/182s] ERROR Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(Epoch) > > test_check("Epoch") Downloading FragilityData_subpt2_3.rds | | | 0% | |======================================================================| 100% Request failed (Status code: 502). Retrying in 2s... | | | 0% | |======================================================================| 100% Request failed (Status code: 502). Retrying in 4s... | | | 0% | |======================================================================| 100% Request failed (Status code: 502). Retrying in 8s... | | | 0% | |======================================================================| 100% Saving _problems/test-EpochDownloader-126.R Saving _problems/test-EpochDownloader-138.R Downloading FragilityData_subpt2_3.rds | | | 0% | |======================================================================| 100% Request failed (Status code: 502). Retrying in 2s... | | | 0% | |======================================================================| 100% Request failed (Status code: 502). Retrying in 2s... | | | 0% | |======================================================================| 100% Request failed (Status code: 502). Retrying in 2s... | | | 0% | |======================================================================| 100% Saving _problems/test-EpochDownloader-149.R Downloading FragilityData_subpt2_3.rds | | | 0% | |======================================================================| 100% Saving _problems/test-EpochDownloader-232.R [ FAIL 5 | WARN 0 | SKIP 0 | PASS 180 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-EpochDownloader.R:126:3'): [ indexing returns correct number of Epoch objects ── Error: Bad Gateway (HTTP 502) Backtrace: ▆ 1. ├─downloader[subset_names] at test-EpochDownloader.R:126:3 2. └─downloader[subset_names] 3. └─Epoch (local) .local(x, i, ...) 4. └─Epoch:::download_to_tmp_folder(x, non_exist_file_names) 5. ├─osfr::osf_download(...) 6. └─osfr:::osf_download.osf_tbl_file(...) 7. └─base::Map(...) 8. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE) 9. └─osfr (local) ``(...) 10. └─osfr:::.wb_download(...) 11. └─res$raise_for_status() 12. ├─fauxpas::http(self, behavior = "stop") 13. └─fauxpas:::http.HttpResponse(self, behavior = "stop") 14. └─tmp$do(response) ── Error ('test-EpochDownloader.R:138:3'): [[ returns a single Epoch object ──── Error in `value[[3L]](cond)`: Error loading file: /var/folders/pk/n4bndnt1287ctrd_ftthnnnr0000gp/T//RtmpCn1eWN/working_dir/Rtmp1qYLAh/7rnft/FragilityData_subpt2_3.rds unknown input format Backtrace: ▆ 1. ├─downloader[[1]] at test-EpochDownloader.R:138:3 2. └─downloader[[1]] 3. └─Epoch (local) .local(x, i, ...) 4. ├─x[i] 5. └─x[i] 6. └─Epoch (local) .local(x, i, ...) 7. └─base::lapply(file_paths, load_single_file) 8. └─Epoch (local) FUN(X[[i]], ...) 9. └─base::tryCatch(...) 10. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 11. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 12. └─value[[3L]](cond) ── Error ('test-EpochDownloader.R:149:3'): $ returns a single Epoch object by name ── Error: Forbidden (HTTP 403) Backtrace: ▆ 1. ├─base::do.call("$", list(downloader, name1)) at test-EpochDownloader.R:149:3 2. ├─``$FragilityData_subpt2_3 3. └─``$FragilityData_subpt2_3 4. ├─x[name] 5. └─x[name] 6. └─Epoch (local) .local(x, i, ...) 7. └─Epoch:::download_to_tmp_folder(x, non_exist_file_names) 8. ├─osfr::osf_download(...) 9. └─osfr:::osf_download.osf_tbl_file(...) 10. └─base::Map(...) 11. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE) 12. └─osfr (local) ``(...) 13. └─osfr:::.wb_download(...) 14. └─res$raise_for_status() 15. ├─fauxpas::http(self, behavior = "stop") 16. └─fauxpas:::http.HttpResponse(self, behavior = "stop") 17. └─tmp$do(response) ── Failure ('test-EpochDownloader.R:232:3'): [ indexing rejects non-whole number ── Expected `downloader[1]` not to throw any errors. Actually got a with message: Forbidden (HTTP 403) ── Error ('test-EpochDownloader.R:238:3'): [[ enforces length 1 ──────────────── Error in `value[[3L]](cond)`: Error loading file: /var/folders/pk/n4bndnt1287ctrd_ftthnnnr0000gp/T//RtmpCn1eWN/working_dir/Rtmp1qYLAh/7rnft/FragilityData_subpt2_3.rds unknown input format Backtrace: ▆ 1. ├─testthat::expect_silent(downloader[["FragilityData_subpt2_3"]]) at test-EpochDownloader.R:238:3 2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise) 3. │ ├─testthat (local) .capture(...) 4. │ │ ├─withr::with_output_sink(...) 5. │ │ │ └─base::force(code) 6. │ │ ├─base::withCallingHandlers(...) 7. │ │ └─base::withVisible(code) 8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 9. ├─downloader[["FragilityData_subpt2_3"]] 10. └─downloader[["FragilityData_subpt2_3"]] 11. └─Epoch (local) .local(x, i, ...) 12. ├─x[i] 13. └─x[i] 14. └─Epoch (local) .local(x, i, ...) 15. └─base::lapply(file_paths, load_single_file) 16. └─Epoch (local) FUN(X[[i]], ...) 17. └─base::tryCatch(...) 18. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 19. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 20. └─value[[3L]](cond) [ FAIL 5 | WARN 0 | SKIP 0 | PASS 180 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [4s/50s] ERROR Error(s) in re-building vignettes: --- re-building ‘Epoch.Rmd’ using rmarkdown Quitting from Epoch.Rmd:53-58 [load_single] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! Service Unavailable (HTTP 503) --- Backtrace: ▆ 1. ├─downloader$FragilityData_subpt01_1 2. └─downloader$FragilityData_subpt01_1 3. ├─x[name] 4. └─x[name] 5. └─Epoch (local) .local(x, i, ...) 6. └─Epoch:::download_to_tmp_folder(x, non_exist_file_names) 7. ├─osfr::osf_download(...) 8. └─osfr:::osf_download.osf_tbl_file(...) 9. └─base::Map(...) 10. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE) 11. └─osfr (local) ``(...) 12. └─osfr:::.wb_download(...) 13. └─res$raise_for_status() 14. ├─fauxpas::http(self, behavior = "stop") 15. └─fauxpas:::http.HttpResponse(self, behavior = "stop") 16. └─tmp$do(response) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'Epoch.Rmd' failed with diagnostics: Service Unavailable (HTTP 503) --- failed re-building ‘Epoch.Rmd’ SUMMARY: processing the following file failed: ‘Epoch.Rmd’ Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 ERRORs See ‘/Users/ripley/R/packages/tests-devel/Epoch.Rcheck/00check.log’ for details. 259.73 real 23.43 user 5.86 sys