* using log directory ‘/Users/ripley/R/packages/tests-SAN/clustGLMM.Rcheck’ * using R Under development (unstable) (2026-07-21 r90286) * using platform: aarch64-apple-darwin25.5.0 * R was compiled by Apple clang version 21.0.0 (clang-2100.1.1.101) GNU Fortran (GCC) 14.2.0 * running under: macOS Tahoe 26.5.2 * using session charset: UTF-8 * current time: 2026-07-22 09:27:24 UTC * using option ‘--no-stop-on-test-error’ * checking for file ‘clustGLMM/DESCRIPTION’ ... OK * this is package ‘clustGLMM’ version ‘1.0’ * package encoding: UTF-8 * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package ‘clustGLMM’ can be installed ... [26s/27s] WARNING Found the following significant warnings: newton_raphson.c:287:34: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value] newton_raphson_bi_dev.c:272:56: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value] newton_raphson_bi_dev.c:293:32: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value] newton_raphson_le0.c:79:34: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value] newton_raphson_le0.c:79:47: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value] newton_raphson_le0.c:96:18: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value] newton_raphson_le0.c:97:33: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value] See ‘/Users/ripley/R/packages/tests-SAN/clustGLMM.Rcheck/00install.out’ for details. * used C compiler: ‘Apple clang version 21.0.0 (clang-2100.1.1.101)’ * used SDK: ‘MacOSX26.5.sdk’ * checking package directory ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [34s/34s] OK * checking tests ... OK Running ‘testthat.R’ * checking package vignettes ... OK * checking re-building of vignette outputs ... [100s/101s] OK * checking for detritus in the temp directory ... OK * DONE Status: 1 WARNING