* installing *source* package ‘spatialkernel’ ... ** package ‘spatialkernel’ successfully unpacked and MD5 sums checked ** using staged installation ** libs make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-LTO/spatialkernel/src' gfortran -fno-optimize-sibling-calls -fpic -g -O2 -mtune=native -Wall -pedantic -flto -c 584.f -o 584.o 584.f:11:32: 11 | parameter (PI25DT = 3.141592653589793238462643d0) | 1 Warning: Change of value in conversion from ‘REAL(8)’ to ‘REAL(4)’ at (1) [-Wconversion] 584.f:31:72: 31 | SUBROUTINE CUBTRI(T, EPS, MCALLS, ANS, ERR, NCALLS, W, NW, CUB 10 | 1 Warning: Line truncated at (1) [-Wline-truncation] 584.f:163:72: 163 | FUNCTION RNDERR(X, A, Y, B) RND 10 | 1 Warning: Line truncated at (1) [-Wline-truncation] 584.f:179:72: 179 | SUBROUTINE CUBRUL(VEC, P, X0, Y0, BH, KER) CUB 10 | 1 Warning: Line truncated at (1) [-Wline-truncation] 584.f:15:9: 15 | ZZ=((X-X0)*(X-X0)+(Y-Y0)*(Y-Y0))/(BH*BH) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] 584.f:19:13: 19 | F = EXP(-ZZ/2.0)/(2.0*PI25DT*BH*BH) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] 584.f:23:13: 23 | F = 2.0*(1.0-ZZ)/(PI25DT*BH*BH) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] 584.f:25:13: 25 | F = 3.0*(1.0-ZZ)*(1.0-ZZ)/(PI25DT*BH*BH) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] 584.f:173:10: 173 | S = X + A | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] 584.f:174:10: 174 | T = S - Y | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] 584.f:175:15: 175 | RNDERR = T - B | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c constrained.c -o constrained.o constrained.c: In function ‘adapt_poly’: constrained.c:277:29: warning: variable ‘neps’ set but not used [-Wunused-but-set-variable] 277 | double *tripts, c1h, c2h, neps, err0; | ^~~~ gfortran -fno-optimize-sibling-calls -fpic -g -O2 -mtune=native -Wall -pedantic -flto -c dokinhat.f -o dokinhat.o dokinhat.f:380:30: 380 | subroutine trykh(x,y,n,z,xp,yp,np,s,ns,hkhat,icounts,hkhats,nptns) | 1 Warning: Unused dummy argument ‘z’ at (1) [-Wunused-dummy-argument] gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c gpc.c -o gpc.o gfortran -fno-optimize-sibling-calls -fpic -g -O2 -mtune=native -Wall -pedantic -flto -c pnp.f -o pnp.o f951: Warning: Nonconforming tab character in column 1 of line 79 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 80 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 81 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 82 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 83 [-Wtabs] f951: Warning: Nonconforming tab character in column 2 of line 84 [-Wtabs] f951: Warning: Nonconforming tab character in column 2 of line 85 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 86 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 87 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 88 [-Wtabs] f951: Warning: Nonconforming tab character in column 3 of line 89 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 90 [-Wtabs] f951: Warning: Nonconforming tab character in column 3 of line 91 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 92 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 93 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 94 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 95 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 96 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 97 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 98 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 99 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 100 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 101 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 102 [-Wtabs] f951: Warning: Nonconforming tab character in column 3 of line 103 [-Wtabs] f951: Warning: Nonconforming tab character in column 3 of line 104 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 105 [-Wtabs] f951: Warning: Nonconforming tab character in column 3 of line 106 [-Wtabs] f951: Warning: Nonconforming tab character in column 3 of line 107 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 108 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 109 [-Wtabs] f951: Warning: Nonconforming tab character in column 3 of line 110 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 111 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 112 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 113 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 114 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 115 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 116 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 117 [-Wtabs] f951: Warning: Nonconforming tab character in column 3 of line 118 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 119 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 120 [-Wtabs] pnp.f:86:30: 86 | IF(N.LE.MAXDIM)GO TO 6 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] pnp.f:91:72: 91 | 1 Y(I)=YY(I)-PY | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 1 at (1) pnp.f:103:72: 103 | 3 IF((Y(I)*X(J)-X(I)*Y(J))/(X(J)-X(I))) 2,4,5 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c risk.c -o risk.o gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c spatialkernel_init.c -o spatialkernel_init.o gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c triangle.c -o triangle.o triangle.c: In function ‘insertvertex’: triangle.c:8430:31: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 8430 | m->lastflip->prevflip = (struct flipstacker *) &insertvertex; | ^ triangle.c: In function ‘segmentintersection’: triangle.c:11718:28: warning: variable ‘collinear’ set but not used [-Wunused-but-set-variable] 11718 | enum finddirectionresult collinear; | ^~~~~~~~~ gcc -shared -g -O2 -Wall -pedantic -mtune=native -flto -fpic -L/usr/local/lib64 -o spatialkernel.so 584.o constrained.o dokinhat.o gpc.o pnp.o risk.o spatialkernel_init.o triangle.o -lgfortran -lm -lquadmath spatialkernel_init.c:32:13: warning: type of ‘psnpoly_’ does not match original declaration [-Wlto-type-mismatch] 32 | extern void F77_NAME(psnpoly)(double *, double *, int *, double *, double *, int *, double *); | ^ pnp.f:111:12: note: ‘psnpoly’ was previously declared here 111 | SUBROUTINE PSNPOLY(PX,PY,PN,XX,YY,N,INOUT) | ^ pnp.f:111:12: note: code may be misoptimized unless ‘-fno-strict-aliasing’ is used make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-LTO/spatialkernel/src' installing to /data/gannet/ripley/R/packages/tests-LTO/Libs/spatialkernel-lib/00LOCK-spatialkernel/00new/spatialkernel/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spatialkernel) Time 0:17.78, 12.76 + 0.91