* installing *source* package ‘rggobi’ ... ** package ‘rggobi’ successfully unpacked and MD5 sums checked ** using staged installation checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for GGOBI... yes configure: creating ./config.status config.status: creating src/Makevars ** libs make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-LTO/rggobi/src' gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c RSEval.c -o RSEval.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from RSEval.c:6: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from RSEval.c:6: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from RSEval.c:6: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from RSEval.c:6: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c brush.c -o brush.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from brush.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from brush.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from brush.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from brush.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c colorSchemes.c -o colorSchemes.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from colorSchemes.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from colorSchemes.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from colorSchemes.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from colorSchemes.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c conversion.c -o conversion.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from conversion.h:4, from conversion.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from conversion.h:4, from conversion.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from conversion.h:4, from conversion.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from conversion.h:4, from conversion.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c data.c -o data.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from data.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from data.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from data.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from data.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ data.c: In function ‘RS_GGOBI_setFile’: data.c:11:11: warning: variable ‘mode’ set but not used [-Wunused-but-set-variable] 11 | DataMode mode; | ^~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c dataset.c -o dataset.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from dataset.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from dataset.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from dataset.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from dataset.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ dataset.c: In function ‘RS_GGOBI_setVariableTypes’: dataset.c:877:11: warning: variable ‘gg’ set but not used [-Wunused-but-set-variable] 877 | ggobid *gg; | ^~ dataset.c:876:11: warning: variable ‘which’ set but not used [-Wunused-but-set-variable] 876 | gint i, which; | ^~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c display.c -o display.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from display.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from display.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from display.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from display.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c displays.c -o displays.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from displays.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from displays.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from displays.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from displays.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c edges.c -o edges.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from edges.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from edges.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from edges.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from edges.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c ggobi.c -o ggobi.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from ggobi.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from ggobi.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from ggobi.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from ggobi.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c identify.c -o identify.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from identify.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from identify.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from identify.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from identify.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c init.c -o init.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from init.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from init.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from init.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from init.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c io.c -o io.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from io.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from io.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from io.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from io.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c keyHandlers.c -o keyHandlers.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from keyHandlers.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from keyHandlers.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from keyHandlers.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from keyHandlers.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c longitudinal.c -o longitudinal.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from longitudinal.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from longitudinal.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from longitudinal.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from longitudinal.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ longitudinal.c: In function ‘RS_GGOBI_setAsTimeVariables’: longitudinal.c:7:11: warning: variable ‘gg’ set but not used [-Wunused-but-set-variable] 7 | ggobid *gg; | ^~ longitudinal.c:6:11: warning: variable ‘which’ set but not used [-Wunused-but-set-variable] 6 | gint i, which; | ^~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c modes.c -o modes.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from modes.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from modes.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from modes.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from modes.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c plot.c -o plot.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from plot.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from plot.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from plot.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from plot.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c plots.c -o plots.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from plots.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from plots.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from plots.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from plots.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c plugins.c -o plugins.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from plugins.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from plugins.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from plugins.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from plugins.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c print.c -o print.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from print.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from print.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from print.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from print.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c rggobi_init.c -o rggobi_init.o gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c session.c -o session.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from session.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from session.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from session.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from session.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c smooth.c -o smooth.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from smooth.c:13: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from smooth.c:13: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from smooth.c:13: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from smooth.c:13: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c ui.c -o ui.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from ui.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from ui.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from ui.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from ui.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -DUSE_EXT_PTR=1 -D_R_=1 -I/usr/include/ggobi -I/usr/include/gtk-2.0 -I/usr/lib64/gtk-2.0/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/atk-1.0 -pthread -I/usr/include/libxml2 -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c utils.c -o utils.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from RUtils.h:4, from utils.c:1: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from RUtils.h:4, from utils.c:1: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from RUtils.h:4, from utils.c:1: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from /usr/include/ggobi/GGobiAPI.h:24, from RSGGobi.h:5, from RUtils.h:4, from utils.c:1: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -shared -g -O2 -Wall -pedantic -mtune=native -flto -fpic -L/usr/local/lib64 -o rggobi.so RSEval.o brush.o colorSchemes.o conversion.o data.o dataset.o display.o displays.o edges.o ggobi.o identify.o init.o io.o keyHandlers.o longitudinal.o modes.o plot.o plots.o plugins.o print.o rggobi_init.o session.o smooth.o ui.o utils.o -lggobi -lgtk-x11-2.0 -lgdk-x11-2.0 -lpangocairo-1.0 -latk-1.0 -lcairo -lgdk_pixbuf-2.0 -lgio-2.0 -lpangoft2-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lfontconfig -lfreetype -lxml2 rggobi_init.c:36:13: warning: type of ‘RS_GGOBI_getIModeNames’ does not match original declaration [-Wlto-type-mismatch] 36 | extern SEXP RS_GGOBI_getIModeNames(SEXP, SEXP); | ^ modes.c:108:1: note: type mismatch in parameter 2 108 | RS_GGOBI(getIModeNames)(USER_OBJECT_ s_type_name) | ^ modes.c:108:1: note: type ‘void’ should match type ‘struct SEXPREC *’ modes.c:108:1: note: ‘RS_GGOBI_getIModeNames’ was previously declared here rggobi_init.c:40:13: warning: type of ‘RS_GGOBI_getPModeNames’ does not match original declaration [-Wlto-type-mismatch] 40 | extern SEXP RS_GGOBI_getPModeNames(SEXP, SEXP); | ^ modes.c:98:1: note: type mismatch in parameter 2 98 | RS_GGOBI(getPModeNames)(USER_OBJECT_ s_type_name) | ^ modes.c:98:1: note: type ‘void’ should match type ‘struct SEXPREC *’ modes.c:98:1: note: ‘RS_GGOBI_getPModeNames’ was previously declared here rggobi_init.c:35:13: warning: type of ‘RS_GGOBI_getIModeName’ does not match original declaration [-Wlto-type-mismatch] 35 | extern SEXP RS_GGOBI_getIModeName(SEXP, SEXP); | ^ modes.c:28:1: note: type mismatch in parameter 2 28 | RS_GGOBI(getIModeName)(USER_OBJECT_ s_display) | ^ modes.c:28:1: note: type ‘void’ should match type ‘struct SEXPREC *’ modes.c:28:1: note: ‘RS_GGOBI_getIModeName’ was previously declared here rggobi_init.c:39:13: warning: type of ‘RS_GGOBI_getPModeName’ does not match original declaration [-Wlto-type-mismatch] 39 | extern SEXP RS_GGOBI_getPModeName(SEXP, SEXP); | ^ modes.c:43:1: note: type mismatch in parameter 2 43 | RS_GGOBI(getPModeName)(USER_OBJECT_ s_display) | ^ modes.c:43:1: note: type ‘void’ should match type ‘struct SEXPREC *’ modes.c:43:1: note: ‘RS_GGOBI_getPModeName’ was previously declared here rggobi_init.c:62:13: warning: type of ‘RS_GGOBI_setPMode’ does not match original declaration [-Wlto-type-mismatch] 62 | extern SEXP RS_GGOBI_setPMode(SEXP, SEXP, SEXP); | ^ modes.c:18:1: note: type mismatch in parameter 3 18 | RS_GGOBI(setPMode)(USER_OBJECT_ name, USER_OBJECT_ s_display) | ^ modes.c:18:1: note: type ‘void’ should match type ‘struct SEXPREC *’ modes.c:18:1: note: ‘RS_GGOBI_setPMode’ was previously declared here rggobi_init.c:61:13: warning: type of ‘RS_GGOBI_setIMode’ does not match original declaration [-Wlto-type-mismatch] 61 | extern SEXP RS_GGOBI_setIMode(SEXP, SEXP, SEXP); | ^ modes.c:7:1: note: type mismatch in parameter 3 7 | RS_GGOBI(setIMode)(USER_OBJECT_ name, USER_OBJECT_ s_display) | ^ modes.c:7:1: note: type ‘void’ should match type ‘struct SEXPREC *’ modes.c:7:1: note: ‘RS_GGOBI_setIMode’ was previously declared here rggobi_init.c:48:13: warning: type of ‘RS_GGOBI_ggobi_find_data_file’ does not match original declaration [-Wlto-type-mismatch] 48 | extern SEXP RS_GGOBI_ggobi_find_data_file(SEXP, SEXP); | ^ ggobi.c:210:1: note: type mismatch in parameter 2 210 | RS_GGOBI(ggobi_find_data_file)(USER_OBJECT_ name) | ^ ggobi.c:210:1: note: type ‘void’ should match type ‘struct SEXPREC *’ ggobi.c:210:1: note: ‘RS_GGOBI_ggobi_find_data_file’ was previously declared here rggobi_init.c:33:13: warning: type of ‘RS_GGOBI_getGGobi’ does not match original declaration [-Wlto-type-mismatch] 33 | extern SEXP RS_GGOBI_getGGobi(SEXP, SEXP); | ^ ggobi.c:58:1: note: type mismatch in parameter 2 58 | RS_GGOBI(getGGobi)(USER_OBJECT_ which) | ^ ggobi.c:58:1: note: type ‘void’ should match type ‘struct SEXPREC *’ ggobi.c:58:1: note: ‘RS_GGOBI_getGGobi’ was previously declared here rggobi_init.c:57:13: warning: type of ‘RS_GGOBI_setEdges’ does not match original declaration [-Wlto-type-mismatch] 57 | extern SEXP RS_GGOBI_setEdges(SEXP, SEXP, SEXP, SEXP, SEXP); | ^ edges.c:106:1: note: type mismatch in parameter 5 106 | RS_GGOBI(setEdges)(USER_OBJECT_ x, USER_OBJECT_ y, USER_OBJECT_ append, USER_OBJECT_ datasetId) | ^ edges.c:106:1: note: type ‘void’ should match type ‘struct SEXPREC *’ edges.c:106:1: note: ‘RS_GGOBI_setEdges’ was previously declared here rggobi_init.c:22:13: warning: type of ‘RS_GGOBI_getConnectedEdges’ does not match original declaration [-Wlto-type-mismatch] 22 | extern SEXP RS_GGOBI_getConnectedEdges(SEXP, SEXP, SEXP); | ^ edges.c:42:1: note: type mismatch in parameter 3 42 | RS_GGOBI(getConnectedEdges)(USER_OBJECT_ edgesetId, USER_OBJECT_ datasetId) | ^ edges.c:42:1: note: type ‘void’ should match type ‘struct SEXPREC *’ edges.c:42:1: note: ‘RS_GGOBI_getConnectedEdges’ was previously declared here rggobi_init.c:44:13: warning: type of ‘RS_GGOBI_getSymbolicEdges’ does not match original declaration [-Wlto-type-mismatch] 44 | extern SEXP RS_GGOBI_getSymbolicEdges(SEXP, SEXP); | ^ edges.c:5:1: note: type mismatch in parameter 2 5 | RS_GGOBI(getSymbolicEdges)(USER_OBJECT_ edgesetId) | ^ edges.c:5:1: note: type ‘void’ should match type ‘struct SEXPREC *’ edges.c:5:1: note: ‘RS_GGOBI_getSymbolicEdges’ was previously declared here rggobi_init.c:31:13: warning: type of ‘RS_GGOBI_getDisplayWidget’ does not match original declaration [-Wlto-type-mismatch] 31 | extern SEXP RS_GGOBI_getDisplayWidget(SEXP, SEXP); | ^ display.c:429:1: note: type mismatch in parameter 2 429 | RS_GGOBI(getDisplayWidget)(USER_OBJECT_ r_display) { | ^ display.c:429:1: note: type ‘void’ should match type ‘struct SEXPREC *’ display.c:429:1: note: ‘RS_GGOBI_getDisplayWidget’ was previously declared here rggobi_init.c:45:13: warning: type of ‘RS_GGOBI_getTourProjection’ does not match original declaration [-Wlto-type-mismatch] 45 | extern SEXP RS_GGOBI_getTourProjection(SEXP, SEXP, SEXP); | ^ display.c:399:1: note: type mismatch in parameter 3 399 | RS_GGOBI(getTourProjection)(USER_OBJECT_ s_display, USER_OBJECT_ s_mode_name) | ^ display.c:399:1: note: type ‘void’ should match type ‘struct SEXPREC *’ display.c:399:1: note: ‘RS_GGOBI_getTourProjection’ was previously declared here rggobi_init.c:64:13: warning: type of ‘RS_GGOBI_setTourProjection’ does not match original declaration [-Wlto-type-mismatch] 64 | extern SEXP RS_GGOBI_setTourProjection(SEXP, SEXP, SEXP, SEXP); | ^ display.c:372:1: note: type mismatch in parameter 4 372 | RS_GGOBI(setTourProjection)(USER_OBJECT_ s_display, USER_OBJECT_ s_mode_name, | ^ display.c:372:1: note: type ‘void’ should match type ‘struct SEXPREC *’ display.c:372:1: note: ‘RS_GGOBI_setTourProjection’ was previously declared here rggobi_init.c:27:13: warning: type of ‘RS_GGOBI_getDisplayDataset’ does not match original declaration [-Wlto-type-mismatch] 27 | extern SEXP RS_GGOBI_getDisplayDataset(SEXP, SEXP); | ^ display.c:305:1: note: type mismatch in parameter 2 305 | RS_GGOBI(getDisplayDataset)(USER_OBJECT_ dpy) | ^ display.c:305:1: note: type ‘void’ should match type ‘struct SEXPREC *’ display.c:305:1: note: ‘RS_GGOBI_getDisplayDataset’ was previously declared here rggobi_init.c:56:13: warning: type of ‘RS_GGOBI_setDisplayVariables’ does not match original declaration [-Wlto-type-mismatch] 56 | extern SEXP RS_GGOBI_setDisplayVariables(SEXP, SEXP, SEXP, SEXP); | ^ display.c:274:1: note: type mismatch in parameter 4 274 | RS_GGOBI(setDisplayVariables)(USER_OBJECT_ vars, USER_OBJECT_ varPrev, USER_OBJECT_ dpy) | ^ display.c:274:1: note: type ‘void’ should match type ‘struct SEXPREC *’ display.c:274:1: note: ‘RS_GGOBI_setDisplayVariables’ was previously declared here rggobi_init.c:30:13: warning: type of ‘RS_GGOBI_getDisplayVariables’ does not match original declaration [-Wlto-type-mismatch] 30 | extern SEXP RS_GGOBI_getDisplayVariables(SEXP, SEXP); | ^ display.c:235:1: note: type mismatch in parameter 2 235 | RS_GGOBI(getDisplayVariables)(USER_OBJECT_ dpy) | ^ display.c:235:1: note: type ‘void’ should match type ‘struct SEXPREC *’ display.c:235:1: note: ‘RS_GGOBI_getDisplayVariables’ was previously declared here rggobi_init.c:38:13: warning: type of ‘RS_GGOBI_getNumPlotsInDisplay’ does not match original declaration [-Wlto-type-mismatch] 38 | extern SEXP RS_GGOBI_getNumPlotsInDisplay(SEXP, SEXP); | ^ display.c:95:1: note: type mismatch in parameter 2 95 | RS_GGOBI(getNumPlotsInDisplay)(USER_OBJECT_ dpy) | ^ display.c:95:1: note: type ‘void’ should match type ‘struct SEXPREC *’ display.c:95:1: note: ‘RS_GGOBI_getNumPlotsInDisplay’ was previously declared here rggobi_init.c:34:13: warning: type of ‘RS_GGOBI_getGGobiForDisplay’ does not match original declaration [-Wlto-type-mismatch] 34 | extern SEXP RS_GGOBI_getGGobiForDisplay(SEXP, SEXP); | ^ display.c:81:1: note: type mismatch in parameter 2 81 | RS_GGOBI(getGGobiForDisplay)(USER_OBJECT_ s_display) | ^ display.c:81:1: note: type ‘void’ should match type ‘struct SEXPREC *’ display.c:81:1: note: ‘RS_GGOBI_getGGobiForDisplay’ was previously declared here rggobi_init.c:14:13: warning: type of ‘RS_GGOBI_createDisplay’ does not match original declaration [-Wlto-type-mismatch] 14 | extern SEXP RS_GGOBI_createDisplay(SEXP, SEXP, SEXP, SEXP, SEXP); | ^ display.c:9:1: note: type mismatch in parameter 5 9 | RS_GGOBI(createDisplay)(USER_OBJECT_ stype, USER_OBJECT_ svars, | ^ display.c:9:1: note: type ‘void’ should match type ‘struct SEXPREC *’ display.c:9:1: note: ‘RS_GGOBI_createDisplay’ was previously declared here rggobi_init.c:16:13: warning: type of ‘RS_GGOBI_datasetDim’ does not match original declaration [-Wlto-type-mismatch] 16 | extern SEXP RS_GGOBI_datasetDim(SEXP, SEXP); | ^ dataset.c:928:1: note: type mismatch in parameter 2 928 | RS_GGOBI(datasetDim)(USER_OBJECT_ data) | ^ dataset.c:928:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:928:1: note: ‘RS_GGOBI_datasetDim’ was previously declared here rggobi_init.c:18:13: warning: type of ‘RS_GGOBI_getCaseColors’ does not match original declaration [-Wlto-type-mismatch] 18 | extern SEXP RS_GGOBI_getCaseColors(SEXP, SEXP, SEXP); | ^ dataset.c:831:1: note: type mismatch in parameter 3 831 | RS_GGOBI(getCaseColors)(USER_OBJECT_ ids, USER_OBJECT_ datasetId) | ^ dataset.c:831:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:831:1: note: ‘RS_GGOBI_getCaseColors’ was previously declared here rggobi_init.c:52:13: warning: type of ‘RS_GGOBI_setCaseColors’ does not match original declaration [-Wlto-type-mismatch] 52 | extern SEXP RS_GGOBI_setCaseColors(SEXP, SEXP, SEXP, SEXP); | ^ dataset.c:803:1: note: type mismatch in parameter 4 803 | RS_GGOBI(setCaseColors)(USER_OBJECT_ vals, USER_OBJECT_ which, USER_OBJECT_ datasetId) | ^ dataset.c:803:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:803:1: note: ‘RS_GGOBI_setCaseColors’ was previously declared here rggobi_init.c:19:13: warning: type of ‘RS_GGOBI_getCaseGlyphs’ does not match original declaration [-Wlto-type-mismatch] 19 | extern SEXP RS_GGOBI_getCaseGlyphs(SEXP, SEXP, SEXP); | ^ dataset.c:748:1: note: type mismatch in parameter 3 748 | RS_GGOBI(getCaseGlyphs)(USER_OBJECT_ ids, USER_OBJECT_ datasetID) | ^ dataset.c:748:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:748:1: note: ‘RS_GGOBI_getCaseGlyphs’ was previously declared here rggobi_init.c:53:13: warning: type of ‘RS_GGOBI_setCaseGlyphs’ does not match original declaration [-Wlto-type-mismatch] 53 | extern SEXP RS_GGOBI_setCaseGlyphs(SEXP, SEXP, SEXP, SEXP, SEXP); | ^ dataset.c:721:1: note: type mismatch in parameter 5 721 | RS_GGOBI(setCaseGlyphs)(USER_OBJECT_ vals, USER_OBJECT_ sizes, USER_OBJECT_ which, | ^ dataset.c:721:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:721:1: note: ‘RS_GGOBI_setCaseGlyphs’ was previously declared here rggobi_init.c:60:13: warning: type of ‘RS_GGOBI_setIDs’ does not match original declaration [-Wlto-type-mismatch] 60 | extern SEXP RS_GGOBI_setIDs(SEXP, SEXP, SEXP); | ^ dataset.c:622:1: note: return value type mismatch 622 | RS_GGOBI(setIDs)(USER_OBJECT_ ids, USER_OBJECT_ datasetId) | ^ dataset.c:622:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:622:1: note: ‘RS_GGOBI_setIDs’ was previously declared here rggobi_init.c:63:13: warning: type of ‘RS_GGOBI_setRowNames’ does not match original declaration [-Wlto-type-mismatch] 63 | extern SEXP RS_GGOBI_setRowNames(SEXP, SEXP, SEXP, SEXP); | ^ dataset.c:569:1: note: type mismatch in parameter 4 569 | RS_GGOBI(setRowNames)(USER_OBJECT_ names, USER_OBJECT_ indices, USER_OBJECT_ datasetId) | ^ dataset.c:569:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:569:1: note: ‘RS_GGOBI_setRowNames’ was previously declared here rggobi_init.c:65:13: warning: type of ‘RS_GGOBI_setVariableNames’ does not match original declaration [-Wlto-type-mismatch] 65 | extern SEXP RS_GGOBI_setVariableNames(SEXP, SEXP, SEXP, SEXP); | ^ dataset.c:419:1: note: type mismatch in parameter 4 419 | RS_GGOBI(setVariableNames)(USER_OBJECT_ vars, USER_OBJECT_ names, USER_OBJECT_ datasetId) | ^ dataset.c:419:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:419:1: note: ‘RS_GGOBI_setVariableNames’ was previously declared here rggobi_init.c:66:13: warning: type of ‘RS_GGOBI_setVariableValues’ does not match original declaration [-Wlto-type-mismatch] 66 | extern SEXP RS_GGOBI_setVariableValues(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP); | ^ dataset.c:381:1: note: type mismatch in parameter 6 381 | RS_GGOBI(setVariableValues)(USER_OBJECT_ vals, USER_OBJECT_ rowIds, | ^ dataset.c:381:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:381:1: note: ‘RS_GGOBI_setVariableValues’ was previously declared here rggobi_init.c:11:13: warning: type of ‘RS_GGOBI_addVariable’ does not match original declaration [-Wlto-type-mismatch] 11 | extern SEXP RS_GGOBI_addVariable(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP); | ^ dataset.c:316:1: note: type mismatch in parameter 6 316 | RS_GGOBI(addVariable)(USER_OBJECT_ vals, USER_OBJECT_ name, USER_OBJECT_ levels, | ^ dataset.c:316:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:316:1: note: ‘RS_GGOBI_addVariable’ was previously declared here rggobi_init.c:21:13: warning: type of ‘RS_GGOBI_getCasesHidden’ does not match original declaration [-Wlto-type-mismatch] 21 | extern SEXP RS_GGOBI_getCasesHidden(SEXP, SEXP); | ^ dataset.c:282:1: note: type mismatch in parameter 2 282 | RS_GGOBI(getCasesHidden)(USER_OBJECT_ datasetId) | ^ dataset.c:282:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:282:1: note: ‘RS_GGOBI_getCasesHidden’ was previously declared here rggobi_init.c:54:13: warning: type of ‘RS_GGOBI_setCasesHidden’ does not match original declaration [-Wlto-type-mismatch] 54 | extern SEXP RS_GGOBI_setCasesHidden(SEXP, SEXP, SEXP, SEXP); | ^ dataset.c:256:1: note: type mismatch in parameter 4 256 | RS_GGOBI(setCasesHidden)(USER_OBJECT_ vals, USER_OBJECT_ which, USER_OBJECT_ datasetId) | ^ dataset.c:256:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:256:1: note: ‘RS_GGOBI_setCasesHidden’ was previously declared here rggobi_init.c:58:13: warning: type of ‘RS_GGOBI_setExcludedIndices’ does not match original declaration [-Wlto-type-mismatch] 58 | extern SEXP RS_GGOBI_setExcludedIndices(SEXP, SEXP, SEXP); | ^ dataset.c:243:1: note: type mismatch in parameter 3 243 | RS_GGOBI(setExcludedIndices)(USER_OBJECT_ vals, USER_OBJECT_ datasetId) | ^ dataset.c:243:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:243:1: note: ‘RS_GGOBI_setExcludedIndices’ was previously declared here rggobi_init.c:32:13: warning: type of ‘RS_GGOBI_getExcludedIndices’ does not match original declaration [-Wlto-type-mismatch] 32 | extern SEXP RS_GGOBI_getExcludedIndices(SEXP, SEXP); | ^ dataset.c:235:1: note: type mismatch in parameter 2 235 | RS_GGOBI(getExcludedIndices)(USER_OBJECT_ datasetId) | ^ dataset.c:235:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:235:1: note: ‘RS_GGOBI_getExcludedIndices’ was previously declared here rggobi_init.c:41:13: warning: type of ‘RS_GGOBI_getRowNames’ does not match original declaration [-Wlto-type-mismatch] 41 | extern SEXP RS_GGOBI_getRowNames(SEXP, SEXP); | ^ dataset.c:130:1: note: type mismatch in parameter 2 130 | RS_GGOBI(getRowNames)(USER_OBJECT_ data) | ^ dataset.c:130:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:130:1: note: ‘RS_GGOBI_getRowNames’ was previously declared here rggobi_init.c:42:13: warning: type of ‘RS_GGOBI_getSelectedIndices’ does not match original declaration [-Wlto-type-mismatch] 42 | extern SEXP RS_GGOBI_getSelectedIndices(SEXP, SEXP); | ^ dataset.c:93:1: note: type mismatch in parameter 2 93 | RS_GGOBI(getSelectedIndices)(USER_OBJECT_ datasetId) | ^ dataset.c:93:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:93:1: note: ‘RS_GGOBI_getSelectedIndices’ was previously declared here rggobi_init.c:20:13: warning: type of ‘RS_GGOBI_getCaseIds’ does not match original declaration [-Wlto-type-mismatch] 20 | extern SEXP RS_GGOBI_getCaseIds(SEXP, SEXP); | ^ dataset.c:59:1: note: type mismatch in parameter 2 59 | RS_GGOBI(getCaseIds)(USER_OBJECT_ datasetId) | ^ dataset.c:59:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:59:1: note: ‘RS_GGOBI_getCaseIds’ was previously declared here rggobi_init.c:46:13: warning: type of ‘RS_GGOBI_getVariableNames’ does not match original declaration [-Wlto-type-mismatch] 46 | extern SEXP RS_GGOBI_getVariableNames(SEXP, SEXP, SEXP); | ^ dataset.c:27:1: note: type mismatch in parameter 3 27 | RS_GGOBI(getVariableNames)(USER_OBJECT_ transformed, USER_OBJECT_ datasetId) | ^ dataset.c:27:1: note: type ‘void’ should match type ‘struct SEXPREC *’ dataset.c:27:1: note: ‘RS_GGOBI_getVariableNames’ was previously declared here rggobi_init.c:23:13: warning: type of ‘RS_GGOBI_getData’ does not match original declaration [-Wlto-type-mismatch] 23 | extern SEXP RS_GGOBI_getData(SEXP, SEXP); | ^ data.c:74:1: note: type mismatch in parameter 2 74 | RS_GGOBI(getData)(USER_OBJECT_ datasetId) | ^ data.c:74:1: note: type ‘void’ should match type ‘struct SEXPREC *’ data.c:74:1: note: ‘RS_GGOBI_getData’ was previously declared here make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-LTO/rggobi/src' installing to /data/gannet/ripley/R/packages/tests-LTO/Libs/rggobi-lib/00LOCK-rggobi/00new/rggobi/libs ** R ** data *** moving datasets to lazyload DB ** demo ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rggobi) Time 0:46.06, 24.03 + 3.30