* installing *source* package ‘modello’ ... ** package ‘modello’ successfully unpacked and MD5 sums checked ** using staged installation ** libs make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-LTO/modello/src' gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -flto=10 -c Rfuns.c -o Rfuns.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -flto=10 -c Rinterfaces.c -o Rinterfaces.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c env.f95 -o env.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c types.f95 -o types.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c registers.f95 -o registers.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c errwarn.f95 -o errwarn.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c utils.f95 -o utils.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c math.f95 -o math.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c numbers_utils.f95 -o numbers_utils.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c nodes_utils.f95 -o nodes_utils.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c operators.f95 -o operators.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c node_operators.f95 -o node_operators.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c nodes.f95 -o nodes.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c numbers.f95 -o numbers.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c numbers_modifiers.f95 -o numbers_modifiers.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c numbers_math.f95 -o numbers_math.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c optim_utils.f95 -o optim_utils.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c sgd.f95 -o sgd.o gfortran -fno-optimize-sibling-calls -fopenmp -L"/data/gannet/ripley/R/R-devel/lib" -lRlapack -L"/data/gannet/ripley/R/R-devel/lib" -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse -fpic -g -O2 -mtune=native -Wall -pedantic -flto=10 -c interfaces.f95 -o interfaces.o gfortran -shared -L/usr/local/lib64 -o modello.so Rfuns.o Rinterfaces.o env.o errwarn.o interfaces.o math.o node_operators.o nodes.o nodes_utils.o numbers.o numbers_math.o numbers_modifiers.o numbers_utils.o operators.o optim_utils.o registers.o sgd.o types.o utils.o -fopenmp -L/data/gannet/ripley/R/R-devel/lib -lRlapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -g -O2 -mtune=native -Wall -pedantic -msse2 -mfpmath=sse errwarn.f95:264:38: warning: type of ‘r__warn’ does not match original declaration [-Wlto-type-mismatch] 264 | call r__warn(wrn_msg//C_NULL_CHAR) | ^ Rfuns.c:41:6: note: type mismatch in parameter 2 41 | void r__warn_ (char *msg) { | ^ Rfuns.c:41:6: note: type ‘void’ should match type ‘long int’ Rfuns.c:41:6: note: ‘r__warn_’ was previously declared here errwarn.f95:249:39: warning: type of ‘r__error’ does not match original declaration [-Wlto-type-mismatch] 249 | call r__error(err_msg//C_NULL_CHAR) | ^ Rfuns.c:33:6: note: type mismatch in parameter 2 33 | void r__error_ (char *msg) { | ^ Rfuns.c:33:6: note: type ‘void’ should match type ‘long int’ Rfuns.c:33:6: note: ‘r__error_’ was previously declared here make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-LTO/modello/src' installing to /data/gannet/ripley/R/packages/tests-LTO/Libs/modello-lib/00LOCK-modello/00new/modello/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (modello) Time 1:45.76, 60.25 + 1.98