* installing *source* package ‘jwutil’ ...
** package ‘jwutil’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-LTO/jwutil/src'
g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-4.1/Rcpp/include' -I'/data/gannet/ripley/R/test-4.1/testthat/include' -I/usr/local/include  -I. -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -flto=10 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-4.1/Rcpp/include' -I'/data/gannet/ripley/R/test-4.1/testthat/include' -I/usr/local/include  -I. -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -flto=10 -c get_current_stdlib.cpp -o get_current_stdlib.o
g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-4.1/Rcpp/include' -I'/data/gannet/ripley/R/test-4.1/testthat/include' -I/usr/local/include  -I. -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -flto=10 -c jwomp.cpp -o jwomp.o
g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-4.1/Rcpp/include' -I'/data/gannet/ripley/R/test-4.1/testthat/include' -I/usr/local/include  -I. -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -flto=10 -c rowsorted.cpp -o rowsorted.o
g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-4.1/Rcpp/include' -I'/data/gannet/ripley/R/test-4.1/testthat/include' -I/usr/local/include  -I. -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -flto=10 -c stdlib.cpp -o stdlib.o
g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-4.1/Rcpp/include' -I'/data/gannet/ripley/R/test-4.1/testthat/include' -I/usr/local/include  -I. -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -flto=10 -c test-jwutil.cpp -o test-jwutil.o
g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-4.1/Rcpp/include' -I'/data/gannet/ripley/R/test-4.1/testthat/include' -I/usr/local/include  -I. -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -flto=10 -c test-runner.cpp -o test-runner.o
g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-4.1/Rcpp/include' -I'/data/gannet/ripley/R/test-4.1/testthat/include' -I/usr/local/include  -I. -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -flto=10 -c util.cpp -o util.o
g++ -std=gnu++11 -shared -L/usr/local/lib64 -o jwutil.so RcppExports.o get_current_stdlib.o jwomp.o rowsorted.o stdlib.o test-jwutil.o test-runner.o util.o -I. -fopenmp
RcppExports.cpp:104:17: warning: ‘run_testthat_tests’ violates the C++ One Definition Rule [-Wodr]
  104 | RcppExport SEXP run_testthat_tests();
      |                 ^
/data/gannet/ripley/R/test-4.1/testthat/include/testthat/testthat.h:165:17: note: type mismatch in parameter 1
  165 | extern "C" SEXP run_testthat_tests(SEXP use_xml_sxp) {
      |                 ^
/data/gannet/ripley/R/test-4.1/testthat/include/testthat/testthat.h:165:17: note: type ‘struct SEXPREC *’ should match type ‘void’
/data/gannet/ripley/R/test-4.1/testthat/include/testthat/testthat.h:165:17: note: ‘run_testthat_tests’ was previously declared here
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-LTO/jwutil/src'
installing to /data/gannet/ripley/R/packages/tests-LTO/Libs/jwutil-lib/00LOCK-jwutil/00new/jwutil/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (jwutil)
Time 1:56.28, 88.84 + 5.36