* installing *source* package ‘EMMIXskew’ ... ** package ‘EMMIXskew’ successfully unpacked and MD5 sums checked ** using staged installation ** libs make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-LTO/EMMIXskew/src' gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c EMMIXskew_init.c -o EMMIXskew_init.o gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c density.c -o density.o gfortran -fno-optimize-sibling-calls -fpic -g -O2 -mtune=native -Wall -pedantic -flto -c density2.f -o density2.o gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c distance.c -o distance.o gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c estep.c -o estep.o gfortran -fno-optimize-sibling-calls -fpic -g -O2 -mtune=native -Wall -pedantic -flto -c mixda.f -o mixda.o gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c mixem.c -o mixem.o gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c mixinit.c -o mixinit.o gfortran -fno-optimize-sibling-calls -fpic -g -O2 -mtune=native -Wall -pedantic -flto -c mixmsn.f -o mixmsn.o gfortran -fno-optimize-sibling-calls -fpic -g -O2 -mtune=native -Wall -pedantic -flto -c mixmsnda.f -o mixmsnda.o gfortran -fno-optimize-sibling-calls -fpic -g -O2 -mtune=native -Wall -pedantic -flto -c mixmst.f -o mixmst.o mixmst.f:118:72: 118 | do 200 k=j,p | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 200 at (1) gfortran -fno-optimize-sibling-calls -fpic -g -O2 -mtune=native -Wall -pedantic -flto -c mixmstda.f -o mixmstda.o gfortran -fno-optimize-sibling-calls -fpic -g -O2 -mtune=native -Wall -pedantic -flto -c mixmvnda.f -o mixmvnda.o gfortran -fno-optimize-sibling-calls -fpic -g -O2 -mtune=native -Wall -pedantic -flto -c mixmvtda.f -o mixmvtda.o gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c module.c -o module.o gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c mstep.c -o mstep.o gfortran -fno-optimize-sibling-calls -fpic -g -O2 -mtune=native -Wall -pedantic -flto -c predmixdamsn.f -o predmixdamsn.o gfortran -fno-optimize-sibling-calls -fpic -g -O2 -mtune=native -Wall -pedantic -flto -c predmixdamst.f -o predmixdamst.o gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c scaestep.c -o scaestep.o gfortran -fno-optimize-sibling-calls -fpic -g -O2 -mtune=native -Wall -pedantic -flto -c scamstep.f -o scamstep.o scamstep.f:35:72: 35 | do 200 k=j,p | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 200 at (1) scamstep.f:55:72: 55 | do 10 j=1,p | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1) gcc -I"/data/gannet/ripley/R/LTO/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -flto -c zeroin.c -o zeroin.o gcc -shared -g -O2 -Wall -pedantic -mtune=native -flto -fpic -L/usr/local/lib64 -o EMMIXskew.so EMMIXskew_init.o density.o density2.o distance.o estep.o mixda.o mixem.o mixinit.o mixmsn.o mixmsnda.o mixmst.o mixmstda.o mixmvnda.o mixmvtda.o module.o mstep.o predmixdamsn.o predmixdamst.o scaestep.o scamstep.o zeroin.o -L/data/gannet/ripley/R/LTO/lib -lRlapack -L/data/gannet/ripley/R/LTO/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath density2.f:181:6: warning: type of ‘dgemv’ does not match original declaration [-Wlto-type-mismatch] 181 | call dgemv("N", p, p, one, inv2, p, wx, 1, zero, wd, 1); | ^ /data/gannet/ripley/R/LTO/include/R_ext/BLAS.h:107:1: note: type mismatch in parameter 12 107 | F77_NAME(dgemv)(const char *trans, const int *m, const int *n, | ^ /data/gannet/ripley/R/LTO/include/R_ext/BLAS.h:107:1: note: type ‘void’ should match type ‘long int’ /data/gannet/ripley/R/LTO/include/R_ext/BLAS.h:107:1: note: ‘dgemv_’ was previously declared here make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-LTO/EMMIXskew/src' installing to /data/gannet/ripley/R/packages/tests-LTO/Libs/EMMIXskew-lib/00LOCK-EMMIXskew/00new/EMMIXskew/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (EMMIXskew) Time 0:13.48, 9.54 + 0.96