* using log directory ‘/data/gannet/ripley/R/packages/tests-Intel/Rmixmod.Rcheck’ * using R Under development (unstable) (2024-08-21 r87038) * using platform: x86_64-pc-linux-gnu * R was compiled by Intel(R) oneAPI DPC++/C++ Compiler 2024.2.1 (2024.2.1.20240711) ifx (IFX) 2024.2.1 20240711 * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘Rmixmod/DESCRIPTION’ ... OK * this is package ‘Rmixmod’ version ‘2.1.10’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘Rmixmod’ can be installed ... [593s/411s] OK * used C compiler: ‘Intel(R) oneAPI DPC++/C++ Compiler 2024.2.1 (2024.2.1.20240711)’ * used C++ compiler: ‘Intel(R) oneAPI DPC++/C++ Compiler 2024.2.1 (2024.2.1.20240711)’ * checking C++ specification ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [16s/20s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking examples ... ERROR Running examples in ‘Rmixmod-Ex.R’ failed The error most likely occurred in: > ### Name: plot > ### Title: Plotting of a class ['Mixmod'] > ### Aliases: plot plot,Mixmod-method > > ### ** Examples > > ## for quantitative case > data(iris) > xem <- mixmodCluster(iris[1:4], 3) > plot(xem) [1] 1 [1] 2 [1] 3 [1] 4 Error in eigen(A) : infinite or missing values in 'x' Calls: plot -> plot -> .local -> plotCluster -> ellipse -> eigen Execution halted * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘clustering1test.R’ Running ‘clusteringParametertest.R’ Running ‘clusteringPartitiontest.R’ Running ‘heterogeneousDAtest.R’ Running ‘heterogeneousclusteringtest.R’ Running ‘ssupervised.R’ Running ‘test.R’ [9s/11s] [15s/19s] OK * checking PDF version of manual ... [10s/16s] OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/data/gannet/ripley/R/packages/tests-Intel/Rmixmod.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 8:57.04, 636.39 + 48.52