* installing *source* package ‘lclGWAS’ ...
** package ‘lclGWAS’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 16.0.0 (https://github.com/llvm/llvm-project.git 2133e8b9f942f91ec54e28c580fccf6d6b26c62e)’
using C++ compiler: ‘clang version 16.0.0 (https://github.com/llvm/llvm-project.git 2133e8b9f942f91ec54e28c580fccf6d6b26c62e)’
using C++11
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang-trunk/lclGWAS/src'
/usr/local/clang-trunk/bin/clang -std=gnu2x -I"/data/gannet/ripley/R/R-clang-trunk/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang-trunk/include    -fpic  -O3 -Wall -pedantic -Wstrict-prototypes  -c Cuhre.c -o Cuhre.o
In file included from Cuhre.c:9:
In file included from ./util.h:11:
In file included from ./decl.h:9:
./stddecl.h:86:16: error: expected identifier
typedef enum { false, true } bool;
               ^
./stddecl.h:86:23: error: expected identifier
typedef enum { false, true } bool;
                      ^
./stddecl.h:86:29: error: expected ';' after enum
typedef enum { false, true } bool;
                            ^
                            ;
./stddecl.h:86:1: warning: typedef requires a name [-Wmissing-declarations]
typedef enum { false, true } bool;
^~~~~~~
./stddecl.h:86:30: warning: declaration does not declare anything [-Wmissing-declarations]
typedef enum { false, true } bool;
                             ^~~~
2 warnings and 3 errors generated.
make[1]: *** [/data/gannet/ripley/R/R-clang-trunk/etc/Makeconf:191: Cuhre.o] Error 1
/usr/local/clang-trunk/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang-trunk/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang-trunk/include    -fpic  -O3 -Wall -pedantic -frtti  -c RcppExports.cpp -o RcppExports.o
/usr/local/clang-trunk/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang-trunk/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang-trunk/include    -fpic  -O3 -Wall -pedantic -frtti  -c alphaEst.cpp -o alphaEst.o
/usr/local/clang-trunk/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang-trunk/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang-trunk/include    -fpic  -O3 -Wall -pedantic -frtti  -c betaEst.cpp -o betaEst.o
In file included from betaEst.cpp:15:
/data/gannet/ripley/R/test-clang/BH/include/boost/bind.hpp:36:1: warning: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE(
^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
                                 ^
<scratch space>:101:2: note: expanded from here
 message("The practice of declaring the Bind placeholders (_1, _2, ...) " "in the global namespace is deprecated. Please use " "<boost/bind/bind.hpp> + using namespace boost::placeholders, " "or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.")
 ^
In file included from betaEst.cpp:18:
In file included from ./fam_LLBeta.h:16:
./integrand.h:92:3: warning: misleading indentation; statement is not part of the previous 'else' [-Wmisleading-indentation]
                if(exp_part == INFINITY)
                ^
./integrand.h:85:6: note: previous statement is here
        else
        ^
In file included from betaEst.cpp:18:
In file included from ./fam_LLBeta.h:17:
./likelihood_ind.h:70:3: warning: misleading indentation; statement is not part of the previous 'else' [-Wmisleading-indentation]
                if(exp_part == INFINITY)
                ^
./likelihood_ind.h:63:6: note: previous statement is here
        else
        ^
3 warnings generated.
/usr/local/clang-trunk/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang-trunk/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang-trunk/include    -fpic  -O3 -Wall -pedantic -frtti  -c fminbr.cpp -o fminbr.o
In file included from fminbr.cpp:52:
In file included from ./fminbr.h:3:
/data/gannet/ripley/R/test-clang/BH/include/boost/bind.hpp:36:1: warning: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE(
^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
                                 ^
<scratch space>:6:2: note: expanded from here
 message("The practice of declaring the Bind placeholders (_1, _2, ...) " "in the global namespace is deprecated. Please use " "<boost/bind/bind.hpp> + using namespace boost::placeholders, " "or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.")
 ^
1 warning generated.
/usr/local/clang-trunk/bin/clang -std=gnu2x -I"/data/gannet/ripley/R/R-clang-trunk/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang-trunk/include    -fpic  -O3 -Wall -pedantic -Wstrict-prototypes  -c init.c -o init.o
/usr/local/clang-trunk/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang-trunk/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/BH/include' -isystem /usr/local/clang-trunk/include    -fpic  -O3 -Wall -pedantic -frtti  -c varEst.cpp -o varEst.o
In file included from varEst.cpp:14:
/data/gannet/ripley/R/test-clang/BH/include/boost/bind.hpp:36:1: warning: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE(
^
/data/gannet/ripley/R/test-clang/BH/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
                                 ^
<scratch space>:101:2: note: expanded from here
 message("The practice of declaring the Bind placeholders (_1, _2, ...) " "in the global namespace is deprecated. Please use " "<boost/bind/bind.hpp> + using namespace boost::placeholders, " "or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.")
 ^
In file included from varEst.cpp:17:
In file included from ./fam_LLVar.h:16:
./integrand.h:92:3: warning: misleading indentation; statement is not part of the previous 'else' [-Wmisleading-indentation]
                if(exp_part == INFINITY)
                ^
./integrand.h:85:6: note: previous statement is here
        else
        ^
In file included from varEst.cpp:17:
In file included from ./fam_LLVar.h:17:
./likelihood_ind.h:70:3: warning: misleading indentation; statement is not part of the previous 'else' [-Wmisleading-indentation]
                if(exp_part == INFINITY)
                ^
./likelihood_ind.h:63:6: note: previous statement is here
        else
        ^
3 warnings generated.
make[1]: Target 'all' not remade because of errors.
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang-trunk/lclGWAS/src'
ERROR: compilation failed for package ‘lclGWAS’
* removing ‘/data/gannet/ripley/R/packages/tests-clang-trunk/lclGWAS.Rcheck/lclGWAS’