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Exercises

Exercises from The Analysis of Biological Networks

Exercise Week 2 & Model Solution - Shortest Paths and Spanning Trees

Exercise Week 3 & Model Solution - Connected Components and Flows

Exercise Week 6 & Model Solution - Network Inference and Robustness

 

Exercises from Bioinformatics & Computational Biology

Exercise 1 & Model Solutions - Substitution Models

Exercise 2 & Model Solutions - Tree Counting and Ancestral Analysis

Exercise 3 & Model Solutions - Phylogeny Reconstruction

Exercise 4 & Model Solutions - Alignment and Recombination

Exercise 5 & Model Solutions - Statistical Alignment

Exercise 6 & Model Solutions - RNA Secondary Structure

Exercise 7 & Model Solutions - Hidden Markov Models