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2011 Timetable

The 2011 summer school ran from July 11th to August 19th. Lectures took place each morning at 8.30am, after which students worked on their projects. The lecture timetable is shown below.


Week 1

Jotun Hein - Introduction to the summer school

 

Willie Taylor (Mill Hill) - Protein Structure Evolution

 

Steven Kelly - Gene Expression/regulation in Space-Time

 

Gil McVean - The 1000 Genomes Project

 

Student Presentations


Week 2

Joe Pitt-Francis - High performance computing for Cardiac modelling

 

Wim Hordijk - Self Replicating Molecular Systems

 

Carsten Wiuf - Models of Protein Interaction Network Evolution

 

Miltos Tsiantis - Leaves and their evolution

 

Wim Hordijk - Cellular automata and emergence


Week 3

Rune Lyngsø - Hidden Markov Models

 

Thomas Mailund - CoaHMM

 

Rune Lyngsø - RNA Secondary Structure

 

Thomas Mailund - Genetic Mapping

 

Bela Novak - Dynamics Models of the Cell Cycle


Week 4

Adam Novak - Statistical Alignment

 

Rune Lyngsø - Grammars and Biological Sequences

 

Adam Novak - Spannoid Alignment and Footprinting

 

Gail Preston - Bacterial Genomes and Metabolism

 

Student Presentations


Week 5

Richard Mott - Imprinting in Mice

 

Caleb Webber - Enrichment Analysis for Functional Characterisation

 

Jotun Hein - Stochastic Models of Sequence Evolution

 

Nick Jones - Networks

 

David Gavaghan - Doing a DPhil in Oxford


Week 6

Phil Biggin - Molecular Dynamics and Function

 

Phil Blunsom - Computer comparison of languages & automatic translation

 

Jotun Hein - Comparative Biology

 

Elspeth Garman - Analysing protein structure

 

Final Student Presentations