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IMGT®, the international ImMunoGeneTics information system® | http://www.imgt.org |
Citing IMGT/GENE-DB
: Giudicelli, V. et al. Nucleic Acids Res., 33: D256 - D261 (2005).
PMID: 15608191
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IMGT/GENE-DB program version: 3.1.21 (17 January 2019)
IMGT/GENE-DB data updates
The FASTA header contains 15 fields separated by '|': 1. IMGT/LIGM-DB accession number(s) 2. IMGT gene and allele name 3. species 4. IMGT allele functionality 5. exon(s), region name(s), or extracted label(s) 6. start and end positions in the IMGT/LIGM-DB accession number(s) 7. number of nucleotides in the IMGT/LIGM-DB accession number(s) 8. codon start, or 'NR' (not relevant) for non coding labels 9. +n: number of nucleotides (nt) added in 5' compared to the corresponding label extracted from IMGT/LIGM-DB 10. +n or -n: number of nucleotides (nt) added or removed in 3' compared to the corresponding label extracted from IMGT/LIGM-DB 11. +n, -n, and/or nS: number of added, deleted, and/or substituted nucleotides to correct sequencing errors, or 'not corrected' if non corrected sequencing errors 12. number of amino acids (AA): this field indicates that the sequence is in amino acids 13. number of characters in the sequence: nt (or AA)+IMGT gaps=total 14. partial (if it is) 15. reverse complementary (if it is)
>AY386694|IGHV1S1*01|Oryctolagus cuniculus|F|V-REGION|2148..2434|287 nt|1| | | |95 AA|95+11=106| | | QEQLKESGG.RLVMPGGILTLTCTASGSNI....SSYGVSWFRQAPGKGLEWIRYISYG. ..GSAYYKSWVK.GRFTISKTSS..TVDLKMTSLTASDTATYFCAR >AY386694|IGHV1S13*01|Oryctolagus cuniculus|F|V-REGION|105318..105604|287 nt|1| | | |95 AA|95+11=106| | | QEQLEESGG.GLVTPGGTLTLTCTVSGFSL....SSYGVSWVRQAAGKGLEWIGYISSS. ..GSAYYASWVN.GRFTISKTSS..TVDLKMTSLRAADTATYFCAR >AY386697|IGHV1S17*01|Oryctolagus cuniculus|F|V-REGION|4344..4630|287 nt|1| | | |95 AA|95+11=106| | | QEQQKESGG.RLVMPGGSLTLTCTVSGFSL....SSYNMGWVRQAPGEGLEYIGWISTG. ..GSAYYASWVN.GRFTISKTST..TMDLKMTSLTAADTATYFCAR >AY386697|IGHV1S19*01|Oryctolagus cuniculus|P|V-REGION|15914..16134|221 nt|1| | | |73 AA|73+33=106|partial in 5' and in 3' | | .......................GVSGFSI....SSYAMIWVHQAPEEGLEYIRIINTG. ..GSAYYASWVN.GRFTISRTST..TVDLKMTSLTAADTATYFCAR >AY386697|IGHV1S21*01|Oryctolagus cuniculus|P|V-REGION|32833..33119|287 nt|1| | | |95 AA|95+11=106| | | EDQLVESRG.GLLQPGGSLTLSCKASGFTI....SSYGVSWVCQAPGKGLEWIGYIYTD. ..GSTYYASWVN.GRFTISKTST..TVDLKMTSLTAADTATYFCAR >AY386697|IGHV1S24*01|Oryctolagus cuniculus|F|V-REGION|49458..49744|287 nt|1| | | |95 AA|95+11=106| | | QEQLKESGG.GLVTPGGILSLTCTASGFSI....SSYRMGWVRQAPGKGLEYIGYISYG. ..GSAYYKSWVK.GRFTISKTSS..TVDLKMTSLTASDKATYFCAR >AY386697|IGHV1S25*01|Oryctolagus cuniculus|F|V-REGION|56920..57206|287 nt|1| | | |95 AA|95+11=106| | | QEQLKESGG.VLVTPGGILSLTCTASGFSI....SSYRMGWVRQAPGKGLEYIGIIYTG. ..GSAYYASWVN.GRFTISKTSS..TVDLKMTSLTAADMATYFCAR >AY386697|IGHV1S26*01|Oryctolagus cuniculus|F|V-REGION|63689..63978|290 nt|1| | | |96 AA|96+10=106| | | Q.SVKESEG.GLFKPTDTLTLTCTVSGFSL....SSYAISWVRQAPGNGLEWIGIINSY. ..GSTYYASWAK.SRSTITRNTNENTVTLKMTSLTAADTATYFCAR >AY386697|IGHV1S28*01|Oryctolagus cuniculus|F|V-REGION|76272..76561|290 nt|1| | | |96 AA|96+10=106| | | Q.SLEESRG.GLIKPGGTLTLTCTASGFTI....SSYDMSWVRQAPGKELEWIGYISYG. ..GSAYYASWAK.SRSTITRNTNENTVTLKMTSLTAADTATYFCAR >AY386697|IGHV1S29*01|Oryctolagus cuniculus|P|V-REGION|79023..79309|287 nt|1| | | |95 AA|95+11=106| | | QEQLKESGR.GLVQPGGSLTLTCTASGFTI....SSNAMIWVRQAPGKGLEYIGFINTG. ..GSTNYASWAN.GRFTISSDNAQNTVSLQMNSLTAADT..YFCAR >AY386697|IGHV1S31*01|Oryctolagus cuniculus|F|V-REGION|88024..88313|290 nt|1| | | |96 AA|96+10=106| | | Q.SVEESRG.GLIKPTDTLTLTCTVSGFSL....SSYGVIWVRQAPGNGLEYIGTIGSS. ..GSAYYASWAK.SRSTITRNTNLNTVTLKMTSLTAADTATYFCAR >AY386697|IGHV1S32*01|Oryctolagus cuniculus|P|V-REGION|91243..91532|290 nt|1| | | |96 AA|96+10=106| | | Q.LVK*SGG.RLVTPGGSLTLTCTVSGFSL....SSYGVSWVRQAPGNGLEYIGFISSG. ..GSTYYASWAK.SRSTITRNTNLNTVTLKMTSLTAADTATYFCAR >AY386697|IGHV1S33*01|Oryctolagus cuniculus|F|V-REGION|95940..96232|293 nt|1| | | |97 AA|97+9=106| | | QEQLEESGG.GLVKPGDTLTLTCKASGFSL....SSYDMSWVRQAPGKGLEWIGFIWSG. ..GSTDYASWVN.GRIIISSDNTQNTVSLLMNSLSARDTATYFCAG >AY386697|IGHV1S34*01|Oryctolagus cuniculus|F|V-REGION|100974..101263|290 nt|1| | | |96 AA|96+10=106| | | Q.SVKESEG.GLFKPTDTLTLTCTVSGFSL....SSNAISWVRQAPGNGLEWIGAIGSS. ..GSAYYASWAK.SRSTITRNTNLNTVTLKMTSLTAADTATYFCAR >M12180|IGHV1S35*01|Oryctolagus cuniculus|P|V-REGION|401..667|267 nt|1| | | |89 AA|89+17=106| | | QEQLEESAG.GLVNPGGTLTLTCTVSGFSL....SSYSMGWVRPAPGKELEYIRIISSG. ..GNTYYASWAR.SRSTISSNT........PRTRFLCK*TVYFCER >M12180|IGHV1S36*01|Oryctolagus cuniculus|F|V-REGION|3485..3771|287 nt|1| | | |95 AA|95+11=106| | | QEQLEESGG.GLVTPGGTLTLTCTASGFSL....SSYGVSWVRQAAGKGLEWIGYISSS. ..GSAYYASWVN.GRFTISKTSS..TVDLKMTSLTASDTATYFCAR >M60121|IGHV1S37*01|Oryctolagus cuniculus|P|V-REGION|221..507|287 nt|1| | | |95 AA|95+11=106| | | QEQLEESGG.HLVTPGGSLTLTCTASGFSL....SSYNMGWVRQAPGKGLEYIGYISSA. ..GSTYYASWVN.GRFTISKTST..TMDLKMNSPTASDTATYFCAR >M60336|IGHV1S39*01|Oryctolagus cuniculus|P|V-REGION|87..373|287 nt|1| | | |95 AA|95+11=106| | | QEQLMESRV.GLLQPGGSLTLS*KASGFTI....SSYGVSWVRQAPGKGLEWIGYIYTD. ..GSTYYASWVN.GRFTISKTST..TVTLKMTSLTAADTATCFCAR >M93173|IGHV1S40*01|Oryctolagus cuniculus|F|V-REGION|673..968|296 nt|1| | | |98 AA|98+8=106| | | Q.SLEESGG.DLVKPGASLTLTCTASGFSFS...SSYYMCWVRQAPGKGLEWIACIYAGS .SGSTYYASWAK.GRFTISKTSS.TTVTLQMTSLTAADTATYFCAR >M93177|IGHV1S42*01|Oryctolagus cuniculus|P|V-REGION|248..535|288 nt|1| | | |96 AA|96+10=106| | | QEQLKESGG.GLVTPGGTLTLTCTASGFTI....SSYHMCWVC*APGKGLEWIGYIYAG. .SGSTWYASWVK.GRFTISKTST..TVDLKMTSLTTEDTATYFCAR >M93179|IGHV1S43*01|Oryctolagus cuniculus|F|V-REGION|241..537|297 nt|1| | | |99 AA|99+7=106| | | QQQLEESGG.GLVKPGGTLTLTCKASGIDFS...SYYYICWVRQAPGKGLELIACIYTS. .SGSTWYASWVN.GRFTISRSTSLNTVDLKMTSLTAADTATYFCAR >M93181|IGHV1S44*01|Oryctolagus cuniculus|F|V-REGION|241..525|285 nt|1| | | |95 AA|95+11=106| | | Q.SLEESGG.RLVTPGGSLTLTCTVSGIDL....TSYAMGWVRQAPGKGLEYIGIISSS. ..GSTYYASWAK.GRFTISKTSST.TVDLKMTSLTTEDTATYFCAG >M93183|IGHV1S45*01|Oryctolagus cuniculus|F|V-REGION|241..539|299 nt|1| | | |99 AA|99+7=106| | | QEQLEESGG.DLVKPEGSLTLTCTASGFSFS...SSYWICWVRQAPGKGLEWIACIYAGS .SGSTYYASWAK.GRFTISKTSST.TVTLQMTSLTAADTATYFCAR >M93184|IGHV1S46*01|Oryctolagus cuniculus|P|V-REGION|241..534|294 nt|1| | | |98 AA|98+8=106| | | QEQLVESGG.GLVTTGESLKLFRKASGFTIS...SSYWICWVRQAPGKGPEWIGYISSA. ..GSTNYTSWVN.G*IIISSNNAQKTLYRQMNSLTARDRALYFCAG >M93185|IGHV1S47*01|Oryctolagus cuniculus|F|V-REGION|241..534|294 nt|1| | | |98 AA|98+8=106| | | QEQLVESGG.GLVQPEGSLTLTCKASGFDF....SSNAMCWVRQAPGKGPEWIACIYNG. .DGSTYYASWVN.GRFTISRSTSLNTVTLQMTSLTAVDTATYFCAR >M93186|IGHV1S48*01|Oryctolagus cuniculus|P|V-REGION|229..522|294 nt|1| | | |98 AA|98+8=106| | | QEQLVESGG.GLVMP*RSLKLSCKASGFTL....SSYWMCWVRQAPGKGLEWNGEINAN. .GGSTWYASRVN.GRFTVSRNNIESKPDLQMSSLTVTDTSLYYCAR >AF176997|IGHV1S49*01|Oryctolagus cuniculus|F|V-REGION|378..665|288 nt|1| | | |96 AA|96+10=106| | | Q.SVKESEG.GLFKPADTLTLTCTASGFTI....SSYGVSWVRQAPGKGPEWIGAIDIN. ..GRTYYATWAK.SRATITRNVNENTVTLRVTSLTAADTATYFCAR >AF176998|IGHV1S50*01|Oryctolagus cuniculus|F|V-REGION|378..665|288 nt|1| | | |96 AA|96+10=106| | | Q.SVKESEG.GLFKPTDTLTLTCTVSGFSL....SSYAISWVRQAPGNGLEYIGYISFT. ..NTAYYASWAK.SRSTITRNTNENTVTLKMTSLTAADTATYFCAR >AF176999|IGHV1S51*01|Oryctolagus cuniculus|F|V-REGION|378..665|288 nt|1| | | |96 AA|96+10=106| | | Q.SVKESEG.GLFKPTDTLTLTCTVSGFSL....SSYNIGWVRQAPGSGLEWIGIISYG. ..GSAYYASWAK.SRSTITRNTNENTVTLKMTSLTAADTATYFCAR >AF177000|IGHV1S52*01|Oryctolagus cuniculus|F|V-REGION|378..665|288 nt|1| | | |96 AA|96+10=106| | | Q.SVKESEG.GLFKPTDTLTLTCTVSGFSL....SSYNMGWVRQAPGNELEWIGIITSY. ..GSTYYASWAK.SRSTITRNTNENPVTLKMTSLTAADTATYFCAR >AF177001|IGHV1S53*01|Oryctolagus cuniculus|F|V-REGION|378..668|291 nt|1| | | |97 AA|97+9=106| | | QEQLEESGG.GLVNPGGTLTLTCTVSGFTI....STYGVSWVRQAPGNGLEWIGTVNYD. ..GSTHYASWAK.SRSTITRNTNENTATLKMTSLTGADTATYFCAR >AF177002|IGHV1S54*01|Oryctolagus cuniculus|F|V-REGION|355..645|291 nt|1| | | |97 AA|97+10=107| | | Q.SLGESRG.GLIKPGGTLTLTCTASGFTI....SSYDMSWVRQAPGEGLEYIGCINSY. ..GTTYYASWAK.SRSTITRNTNENTVTLKMTSLTAADTATYFCGRE >AF177003|IGHV1S55*01|Oryctolagus cuniculus|F|V-REGION|355..645|291 nt|1| | | |97 AA|97+10=107| | | Q.SVKESEG.GLFKPTDTLTLSCTVSGFSL....SSYGVSWVRQAPGEGLECIGWISTD. ..GSTYYASWAK.SRSTITRNTNENTVTLKMTSLTAADTATYFCARA >AF177004|IGHV1S56*01|Oryctolagus cuniculus|F|V-REGION|378..668|291 nt|1| | | |97 AA|97+9=106| | | QEQLKESGG.GLVTPGGILSLTCTASGFSL....STYNMGWVPPAPGKGLEYIGWINTG. ..GSPYCTSWAG.KRSTITRNTSENTVTLEMTSLTAADTATYLCAK >AF177005|IGHV1S57*01|Oryctolagus cuniculus|F|V-REGION|378..665|288 nt|1| | | |96 AA|96+10=106| | | Q.TVKESEG.GLFKPTHTLTLTCTASGFSL....SSYPIIWVRQAPGNGLEWIGITNTY. ..GSPYYASWAK.SRSTITRNTNENTVTLKMTSLTAADTATYFCAR >AF177006|IGHV1S58*01|Oryctolagus cuniculus|F|V-REGION|377..667|291 nt|1| | | |97 AA|97+9=106| | | QEQLKESGG.RLVMPGGSLTITCTVSGFSL....SSNAISWVRQAPGNGLEWIGVINSG. ..GTAYYASWAK.GRSTISRNTKENTVTLQMTSLTAADTATYFCAR >AF177007|IGHV1S59*01|Oryctolagus cuniculus|F|V-REGION|377..664|288 nt|1| | | |96 AA|96+10=106| | | Q.SVKESEG.GLFKPTETLTLTCTVSGFSL....RDYRTGWVRQAPGKELEVVAYIRGD. ..GVIYYASWAK.KRSTITRNTNENTVTLKMTSLTAADTATYFCGR >AF177008|IGHV1S60*01|Oryctolagus cuniculus|F|V-REGION|377..664|288 nt|1| | | |96 AA|96+10=106| | | Q.SVKESEG.GLFKATETLTLTCTLSGFSL....NNNAIHWVRQAPGKGLEWIGMIYGS. ..GATYYASWVS.GRATITRDTNENTVTLKMTSLTDADTATYFCAR >AF177009|IGHV1S61*01|Oryctolagus cuniculus|F|V-REGION|377..664|288 nt|1| | | |96 AA|96+10=106| | | Q.SVKESEG.GLFKPTDTLTLTCTVSGFSL....TSMSISWVRQAPGNGLEWIGAINRV. ..STTYYTTWAK.SRSTITRNTNENTVTLKMTSLTVADTATYFCTR >AF177010|IGHV1S62*01|Oryctolagus cuniculus|F|V-REGION|377..664|288 nt|1| | | |96 AA|96+10=106| | | Q.SVKESEG.GLIKPTDTLTLTCTVSGFSL....TNYIIFWVRQAPGKELEWIGYIHGG. ..GNTYYASWAK.SRSTITRDTKENTVTLKMASLTASDTATYFCAR >AF177011|IGHV1S63*01|Oryctolagus cuniculus|F|V-REGION|377..664|288 nt|1| | | |96 AA|96+10=106| | | Q.SVKESEG.GLFKPTDTLTLTCTASGFSI....SSYRMGWVRQAPGNGLEVIGYIRGD. ..GVTYCASWAK.SRSTITRNTNENTATLKMTSLTAADTATYFCGR >AF177012|IGHV1S64*01|Oryctolagus cuniculus|F|V-REGION|377..664|288 nt|1| | | |96 AA|96+10=106|partial in 3'| | Q.SLEESGG.RLVKPDETLTLTCTVSGIDL....RCYAMGWVRQAPGNGLEYIGAINTD. ..GSPYYASWAK.SRFTISSNTNENTVTLKMTSLTAADTATYFCAR >AF177013|IGHV1S65*01|Oryctolagus cuniculus|F|V-REGION|377..664|288 nt|1| | | |96 AA|96+10=106| | | Q.SLEEFGG.GLIRPASTLTLTCTVSGFSL....NEVGVIWVRQAPGKELEWIGYISYR. ..GNAYYASWAK.SRSTITRNTKENTVTLKVTGLTAADTATYFCAR >AF177014|IGHV1S66*01|Oryctolagus cuniculus|F|V-REGION|377..664|288 nt|1| | | |96 AA|96+10=106| | | Q.SVKESEG.GLFEPTDTLTLTCTVSGFSL....TKYGVMWVRQAPGNGLEWIGFIAYS. ..GNTYYTTWAK.SRSTITRNTNENTVTLKMTSLTAADTATYFCAR >AF177015|IGHV1S67*01|Oryctolagus cuniculus|F|V-REGION|354..641|288 nt|1| | | |96 AA|96+10=106| | | Q.SVKESEG.GLFKPTDTLTLTCTVSGFSL....STYGVIWVRQAPGNGLEYIGSIASG. ..GSAGYASWAK.SRSTITRNTNENTVTLKMTSLTAADTATYFCAA >AF177016|IGHV1S68*01|Oryctolagus cuniculus|F|V-REGION|357..644|288 nt|1| | | |96 AA|96+10=106| | | Q.SVEESRG.GLIKPADTLTLTCTVSGFSL....NNYGVIWVRQAPGSGLEYIGTIDIG. ..VTAFYASWAK.SRSTITKNTNENTVTLRMTSLTAADTATYFCAS >M93171|IGHV1S69*01|Oryctolagus cuniculus|F|V-REGION|239..522|284 nt|1| | | |94 AA|94+12=106| | | Q.SVEESGG.RLVTPGTPLTLTCTVSGFSL....SSYAMSWVRQAPGKGLEWIGIISSS. ..GSTYYASWAK.GRFTISKTST..TVDLKITSPTTEDTATYFCAR >AY386694|IGHV1S7*01|Oryctolagus cuniculus|F|V-REGION|61809..62101|293 nt|1| | | |97 AA|97+9=106| | | Q.QLKESGG.GLVKPGGSLKLCCKASGFTF....SSYYMCWVRQAPGKGLEWIGCIYAG. .SGSTHYASWVN.GRFTLSRDNAQSTVCLQLNSLTAADTATYFCAR >AY386694|IGHV1S8*01|Oryctolagus cuniculus|F|V-REGION|74275..74567|293 nt|1| | | |97 AA|97+9=106| | | QKQLVESGG.GLDQPAGSLKLSCKDSGFTL....SSNAMCWVHQAPGKGLEWIACIDSY. ..GSTNYVSRVN.GRFTISSDNTQNMVDLEMNSLTAADMAIYFCAR
Authors: Hugo Duvergey, Denis Moreno, Mansour Saljoqi, Véronique Giudicelli and Marie-Paule Lefranc
IMGT/GENE-DB scientific responsibles: Véronique Giudicelli (Veronique.Giudicelli@igh.cnrs.fr) and Marie-Paule Lefranc (Marie-Paule.Lefranc@igh.cnrs.fr)
Software material and data coming from IMGT server may be used for academic research only,
provided that it is referred to IMGT®, and cited as
"IMGT®, the international ImMunoGeneTics information system®
http://www.imgt.org
(founder and director: Marie-Paule Lefranc, Montpellier, France)."
References to cite:
Lefranc, M.-P. et al.,
Nucleic Acids Research, 27, 209-212 (1999)
Cover of NAR;
Ruiz, M. et al.,
Nucleic Acids Research, 28, 219-221 (2000);
Lefranc, M.-P.,
Nucleic Acids Research, 29, 207-209 (2001);
Lefranc, M.-P.,
Nucleic Acids Res., 31, 307-310 (2003);
Lefranc, M.-P. et al.,
In Silico Biol., 5, 0006 (2004) [Epub],
5, 45-60 (2005);
Lefranc, M.-P. et al.,
Nucleic Acids Res., 33, D593-D597 (2005)
Full text,
Lefranc, M.-P. et al.,
Nucleic Acids Research 2009 37(Database issue): D1006-D1012; doi:10.1093/nar/gkn838
Full text.
For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.
IMGT® Founder and Executive Director Emeritus:
Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr
IMGT® Director:
Sofia Kossida
Sofia.Kossida@igh.cnrs.fr
Bioinformatics manager:
Véronique Giudicelli
Veronique.Giudicelli@igh.cnrs.fr
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Patrice.Duroux@igh.cnrs.fr
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