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IMGT®, the international ImMunoGeneTics information system® | http://www.imgt.org |
Citing IMGT/GENE-DB
: Giudicelli, V. et al. Nucleic Acids Res., 33: D256 - D261 (2005).
PMID: 15608191
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IMGT/GENE-DB program version: 3.1.21 (17 January 2019)
IMGT/GENE-DB data updates
The FASTA header contains 15 fields separated by '|': 1. IMGT/LIGM-DB accession number(s) 2. IMGT gene and allele name 3. species 4. IMGT allele functionality 5. exon(s), region name(s), or extracted label(s) 6. start and end positions in the IMGT/LIGM-DB accession number(s) 7. number of nucleotides in the IMGT/LIGM-DB accession number(s) 8. codon start, or 'NR' (not relevant) for non coding labels 9. +n: number of nucleotides (nt) added in 5' compared to the corresponding label extracted from IMGT/LIGM-DB 10. +n or -n: number of nucleotides (nt) added or removed in 3' compared to the corresponding label extracted from IMGT/LIGM-DB 11. +n, -n, and/or nS: number of added, deleted, and/or substituted nucleotides to correct sequencing errors, or 'not corrected' if non corrected sequencing errors 12. number of amino acids (AA): this field indicates that the sequence is in amino acids 13. number of characters in the sequence: nt (or AA)+IMGT gaps=total 14. partial (if it is) 15. reverse complementary (if it is)
>X02884|TRAJ1*01|Homo sapiens|ORF|J-REGION|2363..2424|62 nt|2| | | |20 AA|20+0=20| | | YESITSQLQFGKGTRVSTSP >M94081|TRAJ10*01|Homo sapiens|F|J-REGION|73699..73762|64 nt|1| | | |21 AA|21+0=21| | | ILTGGGNKLTFGTGTQLKVEL >M94081|TRAJ11*01|Homo sapiens|F|J-REGION|72706..72765|60 nt|3| | | |19 AA|19+0=19| | | NSGYSTLTFGKGTMLLVSP >X02885|TRAJ12*01|Homo sapiens|F|J-REGION|53..112|60 nt|3| | | |19 AA|19+0=19| | | MDSSYKLIFGSGTRLLVRP >M94081|TRAJ13*01|Homo sapiens|F|J-REGION|71280..71342|63 nt|3| | | |20 AA|20+0=20| | | NSGGYQKVTFGIGTKLQVIP >AB258131|TRAJ13*02|Homo sapiens|F|J-REGION|101..163|63 nt|3| | ||20 AA|20+0=20| | | NSGGYQKVTFGTGTKLQVIP >M94081|TRAJ14*01|Homo sapiens|F|J-REGION|70532..70583|52 nt|1| | | |17 AA|17+0=17| | | IYSTFIFGSGTRLSVKP >X05775|TRAJ15*01|Homo sapiens|F|J-REGION|80..139|60 nt|3| | | |19 AA|19+0=19| | | NQAGTALIFGKGTTLSVSS >M94081|TRAJ15*02|Homo sapiens|F|J-REGION|69836..69895|60 nt|3| | | |19 AA|19+0=19| | | NQAGTALIFGKGTHLSVSS >M94081|TRAJ16*01|Homo sapiens|F|J-REGION|68743..68802|60 nt|3| | | |19 AA|19+0=19| | | FSDGQKLLFARGTMLKVDL >X05773|TRAJ17*01|Homo sapiens|F|J-REGION|173..235|63 nt|3| | | |20 AA|20+0=20| | | IKAAGNKLTFGGGTRVLVKP >M94081|TRAJ18*01|Homo sapiens|F|J-REGION|65876..65941|66 nt|3| | | |21 AA|21+0=21| | | DRGSTLGRLYFGRGTQLTVWP >M94081|TRAJ19*01|Homo sapiens|ORF|J-REGION|65489..65548|60 nt|3| | | |19 AA|19+0=19| | | YQRFYNFTFGKGSKHNVTP >X02884|TRAJ2*01|Homo sapiens|ORF|J-REGION|1397..1462|66 nt|3| | | |21 AA|21+0=21| | | NTGGTIDKLTFGKGTHVFIIS >M94081|TRAJ20*01|Homo sapiens|F|J-REGION|64552..64608|57 nt|3| | | |18 AA|18+0=18| | | SNDYKLSFGAGTTVTVRA >M94081|TRAJ21*01|Homo sapiens|F|J-REGION|63829..63883|55 nt|1| | | |18 AA|18+0=18| | | YNFNKFYFGSGTKLNVKP >X02886|TRAJ22*01|Homo sapiens|F|J-REGION|405..467|63 nt|3| | | |20 AA|20+0=20| | | SSGSARQLTFGSGTQLTVLP >M94081|TRAJ23*01|Homo sapiens|F|J-REGION|60650..60712|63 nt|3| | | |20 AA|20+0=20| | | IYNQGGKLIFGQGTELSVKP >X58763|TRAJ23*02|Homo sapiens|F|J-REGION|61..123|63 nt|3| | | |20 AA|20+0=20| | | IYNQGGKLIFGQGTELSVKP >X02887|TRAJ24*01|Homo sapiens|F|J-REGION|124..186|63 nt|3| | | |20 AA|20+0=20| | | TTDSWGKFEFGAGTQVVVTP >M94081|TRAJ24*02|Homo sapiens|F|J-REGION|60203..60265|63 nt|3| | | |20 AA|20+0=20| | | TTDSWGKLQFGAGTQVVVTP >X02888|TRAJ25*01|Homo sapiens|ORF|J-REGION|35..94|60 nt|3| | | |19 AA|19+0=19| | | EGQGFSFIFGKGTRLLVKP >M94081|TRAJ26*01|Homo sapiens|F|J-REGION|58680..58739|60 nt|3| | | |19 AA|19+0=19| | | DNYGQNFVFGPGTRLSVLP >M94081|TRAJ27*01|Homo sapiens|F|J-REGION|56507..56565|59 nt|2| | | |19 AA|19+0=19| | | NTNAGKSTFGDGTTLTVKP >M94081|TRAJ28*01|Homo sapiens|F|J-REGION|55857..55922|66 nt|3| | | |21 AA|21+0=21| | | YSGAGSYQLTFGKGTKLSVIP >M94081|TRAJ29*01|Homo sapiens|F|J-REGION|54177..54236|60 nt|3| | | |19 AA|19+0=19| | | NSGNTPLVFGKGTRLSVIA >X02884|TRAJ3*01|Homo sapiens|F|J-REGION|504..565|62 nt|2| | | |20 AA|20+0=20| | | GYSSASKIIFGSGTRLSIRP >M94081|TRAJ30*01|Homo sapiens|F|J-REGION|53090..53146|57 nt|3| | | |18 AA|18+0=18| | | NRDDKIIFGKGTRLHILP >M94081|TRAJ31*01|Homo sapiens|F|J-REGION|51207..51263|57 nt|3| | ||18 AA|18+0=18| | | NNNARLMFGDGTQLVVKP >M94081|TRAJ32*01|Homo sapiens|F|J-REGION|49581..49646|66 nt|3| | | |21 AA|21+0=21| | | NYGGATNKLIFGTGTLLAVQP >AF532854|TRAJ32*02|Homo sapiens|(F)|J-REGION|240..299,a|60 nt|3| |1||19 AA|19+0=19| | | GGATNKLIFGTGTLLAVQP >M94081|TRAJ33*01|Homo sapiens|F|J-REGION|48843..48899|57 nt|3| | | |18 AA|18+0=18| | | DSNYQLIWGAGTKLIIKP >M35622|TRAJ34*01|Homo sapiens|F|J-REGION|30..87|58 nt|1| | | |19 AA|19+0=19| | | SYNTDKLIFGTGTRLQVFP >M94081|TRAJ35*01|Homo sapiens|F|J-REGION|46885..46943|59 nt|2| | | |19 AA|19+0=19| | | IGFGNVLHCGSGTQVIVLP >M94081|TRAJ36*01|Homo sapiens|F|J-REGION|45353..45411|59 nt|2| | | |19 AA|19+0=19| | | QTGANNLFFGTGTRLTVIP >M94081|TRAJ37*01|Homo sapiens|F|J-REGION|43993..44054|62 nt|2| | | |20 AA|20+0=20| | | GSGNTGKLIFGQGTTLQVKP >AJ007774|TRAJ37*02|Homo sapiens|(F)|J-REGION|336..397,g|62 nt|2| |1| |20 AA|20+0=20| | | GSSNTGKLIFGQGTTLQVKP >M94081|TRAJ38*01|Homo sapiens|F|J-REGION|42473..42534|62 nt|2| | | |20 AA|20+0=20| | | NAGNNRKLIWGLGTSLAVNP >M94081|TRAJ39*01|Homo sapiens|F|J-REGION|41843..41905|63 nt|3| | | |20 AA|20+0=20| | | NNNAGNMLTFGGGTRLMVKP >M94081|TRAJ4*01|Homo sapiens|F|J-REGION|82396..82458|63 nt|3| | | |20 AA|20+0=20| | | FSGGYNKLIFGAGTRLAVHP >M35620|TRAJ40*01|Homo sapiens|F|J-REGION|35..95|61 nt|1| | | |20 AA|20+0=20| | | TTSGTYKYIFGTGTRLKVLA >M94081|TRAJ41*01|Homo sapiens|F|J-REGION|37900..37961|62 nt|2| | | |20 AA|20+0=20| | | NSNSGYALNFGKGTSLLVTP >M94081|TRAJ42*01|Homo sapiens|F|J-REGION|37130..37195|66 nt|3| | | |21 AA|21+0=21| | | NYGGSQGNLIFGKGTKLSVKP >M94081|TRAJ43*01|Homo sapiens|F|J-REGION|36154..36207|54 nt|3| | | |17 AA|17+0=17| | | NNNDMRFGAGTRLTVKP >M35619|TRAJ44*01|Homo sapiens|F|J-REGION|30..92|63 nt|3| | | |20 AA|20+0=20| | | NTGTASKLTFGTGTRLQVTL >M94081|TRAJ45*01|Homo sapiens|F|J-REGION|34169..34234|66 nt|3| | | |21 AA|21+0=21| | | YSGGGADGLTFGKGTHLIIQP >M94081|TRAJ46*01|Homo sapiens|F|J-REGION|33647..33709|63 nt|3| | | |20 AA|20+0=20| | | KKSSGDKLTFGTGTRLAVRP >M94081|TRAJ47*01|Homo sapiens|F|J-REGION|33096..33152|57 nt|3| | | |18 AA|18+0=18| | | EYGNKLVFGAGTILRVKS >AF033825|TRAJ47*02|Homo sapiens|(F)|J-REGION|312..368,t|57 nt|3| |1| |18 AA|18+0=18| | | EYGNKLVFGAGTILRVKS >M94081|TRAJ48*01|Homo sapiens|F|J-REGION|30737..30799|63 nt|3| | | |20 AA|20+0=20| | | SNFGNEKLTFGTGTRLTIIP >M94081|TRAJ49*01|Homo sapiens|F|J-REGION|29734..29789|56 nt|2| | | |18 AA|18+0=18| | | NTGNQFYFGTGTSLTVIP >M94081|TRAJ5*01|Homo sapiens|F|J-REGION|80444..80503|60 nt|3| | | |19 AA|19+0=19| | | DTGRRALTFGSGTRLQVQP >M94081|TRAJ50*01|Homo sapiens|F|J-REGION|28839..28898|60 nt|3| | | |19 AA|19+0=19| | | KTSYDKVIFGPGTSLSVIP >M94081|TRAJ51*01|Homo sapiens|P|J-REGION|27429..27491|63 nt|3| | | |20 AA|20+0=20| | | MRDSYEKLIFGKET*LTVKP >M94081|TRAJ52*01|Homo sapiens|F|J-REGION|26474..26542|69 nt|3| | | |22 AA|22+0=22| | | NAGGTSYGKLTFGQGTILTVHP >M94081|TRAJ53*01|Homo sapiens|F|J-REGION|23251..23316|66 nt|3| | | |21 AA|21+0=21| | | NSGGSNYKLTFGKGTLLTVNP >M94081|TRAJ54*01|Homo sapiens|F|J-REGION|22534..22593|60 nt|3| | | |19 AA|19+0=19| | | IQGAQKLVFGQGTRLTINP >M94081|TRAJ55*01|Homo sapiens|P|J-REGION|21944..22000|57 nt|3| | | |18 AA|18+0=18| | | KCW*CSCWGKGMSTKINP >M94081|TRAJ56*01|Homo sapiens|F|J-REGION|19768..19829|62 nt|2| | | |20 AA|20+0=20| | | YTGANSKLTFGKGITLSVRP >M94081|TRAJ57*01|Homo sapiens|F|J-REGION|19119..19181|63 nt|3| | | |20 AA|20+0=20| | | TQGGSEKLVFGKGTKLTVNP >M94081|TRAJ58*01|Homo sapiens|ORF|J-REGION|17954..18016|63 nt|3| | | |20 AA|20+0=20| | | *ETSGSRLTFGEGTQLTVNP >M94081|TRAJ59*01|Homo sapiens|ORF|J-REGION|16801..16860|60 nt|3| | ||19 AA|19+0=19| | | KEGNRKFTFGMGTQVRVKL >M16747|TRAJ6*01|Homo sapiens|F|J-REGION|31..92|62 nt|2| | | |20 AA|20+0=20| | | ASGGSYIPTFGRGTSLIVHP >M94081|TRAJ60*01|Homo sapiens|P|J-REGION|16554..16610|57 nt|3| | | |18 AA|18+0=18| | | KIT*MLNFGKGTELIVSL >M94081|TRAJ61*01|Homo sapiens|ORF|J-REGION|15564..15623|60 nt|3| | | |19 AA|19+0=19| | | YRVNRKLTFGANTRGIMKL >M94081|TRAJ7*01|Homo sapiens|F|J-REGION|77821..77879|59 nt|2| | | |19 AA|19+0=19| | | DYGNNRLAFGKGNQVVVIP >M94081|TRAJ8*01|Homo sapiens|F|J-REGION|76346..76405|60 nt|3| | | |19 AA|19+0=19| | | NTGFQKLVFGTGTRLLVSP >M94081|TRAJ9*01|Homo sapiens|F|J-REGION|75756..75816|61 nt|1| | | |20 AA|20+0=20| | | GNTGGFKTIFGAGTRLFVKA
Authors: Hugo Duvergey, Denis Moreno, Mansour Saljoqi, Véronique Giudicelli and Marie-Paule Lefranc
IMGT/GENE-DB scientific responsibles: Véronique Giudicelli (Veronique.Giudicelli@igh.cnrs.fr) and Marie-Paule Lefranc (Marie-Paule.Lefranc@igh.cnrs.fr)
Software material and data coming from IMGT server may be used for academic research only,
provided that it is referred to IMGT®, and cited as
"IMGT®, the international ImMunoGeneTics information system®
http://www.imgt.org
(founder and director: Marie-Paule Lefranc, Montpellier, France)."
References to cite:
Lefranc, M.-P. et al.,
Nucleic Acids Research, 27, 209-212 (1999)
Cover of NAR;
Ruiz, M. et al.,
Nucleic Acids Research, 28, 219-221 (2000);
Lefranc, M.-P.,
Nucleic Acids Research, 29, 207-209 (2001);
Lefranc, M.-P.,
Nucleic Acids Res., 31, 307-310 (2003);
Lefranc, M.-P. et al.,
In Silico Biol., 5, 0006 (2004) [Epub],
5, 45-60 (2005);
Lefranc, M.-P. et al.,
Nucleic Acids Res., 33, D593-D597 (2005)
Full text,
Lefranc, M.-P. et al.,
Nucleic Acids Research 2009 37(Database issue): D1006-D1012; doi:10.1093/nar/gkn838
Full text.
For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.
IMGT® Founder and Executive Director Emeritus:
Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr
IMGT® Director:
Sofia Kossida
Sofia.Kossida@igh.cnrs.fr
Bioinformatics manager:
Véronique Giudicelli
Veronique.Giudicelli@igh.cnrs.fr
Computer manager:
Patrice Duroux
Patrice.Duroux@igh.cnrs.fr
Webmaster:
Amélie Houles
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