* using log directory ‘/data/gannet/ripley/R/packages/tests-Suggests/pliman.Rcheck’ * using R Under development (unstable) (2024-04-19 r86451) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-13 (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘pliman/DESCRIPTION’ ... OK * this is package ‘pliman’ version ‘2.1.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘pliman’ can be installed ... [153s/148s] OK * used C++ compiler: ‘g++-13 (GCC) 13.2.0’ * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [19s/22s] OK * checking whether the package can be loaded with stated dependencies ... [18s/21s] OK * checking whether the package can be unloaded cleanly ... [18s/21s] OK * checking whether the namespace can be loaded with stated dependencies ... [12s/14s] OK * checking whether the namespace can be unloaded cleanly ... [13s/16s] OK * checking loading without being on the library search path ... [12s/16s] OK * checking whether startup messages can be suppressed ... [18s/22s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [109s/146s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking examples ... [13s/16s] ERROR Running examples in ‘pliman-Ex.R’ failed The error most likely occurred in: > ### Name: as_image > ### Title: Create an 'Image' object > ### Aliases: as_image > > ### ** Examples > > img <- + as_image(rnorm(150 * 150 * 3), + dim = c(150, 150, 3), + colormode = 'Color') Error in loadNamespace(x) : there is no package called ‘EBImage’ Calls: as_image ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart Execution halted * checking PDF version of manual ... [18s/23s] OK * checking HTML version of manual ... [10s/18s] NOTE Found the following HTML validation problems: efourier_power.html:100:1 (efourier_power.Rd:35): Warning: trimming empty
  • * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 1 NOTE See ‘/data/gannet/ripley/R/packages/tests-Suggests/pliman.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 12:11.10, 578.63 + 29.78