* installing *source* package ‘subselect’ ... ** package ‘subselect’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (GCC) 13.2.0’ using Fortran compiler: ‘GNU Fortran (GCC) 13.2.0’ using C++ compiler: ‘g++-13 (GCC) 13.2.0’ make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-noRemap/subselect/src' g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c CCRcrt.cpp -o CCRcrt.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c GCDcrt.cpp -o GCDcrt.o In file included from GCDcrt.cpp:4: Qforms.h:79:30: warning: 'virtual extendedleaps::real extendedleaps::sqfdata::updatesum(extendedleaps::mindices&, extendedleaps::vind, extendedleaps::partialsqfdata*, bool&, double) const' was hidden [-Woverloaded-virtual=] 79 | virtual real updatesum(mindices& mmind,vind var,partialsqfdata* pdt,bool& reliable,const double tol) const; | ^~~~~~~~~ In file included from GCDcrt.cpp:5: VSQforms.h:32:22: note: by 'extendedleaps::vsqfdata::updatesum' 32 | real updatesum(direction dir,vind varind,vind dim,partialvsqfdata* newdata,bool& reliable,const double tol) const; | ^~~~~~~~~ Qforms.h:50:30: warning: 'virtual void extendedleaps::qfdata::pivot(extendedleaps::direction, extendedleaps::mindices&, extendedleaps::vind, extendedleaps::vind, extendedleaps::partialqfdata*, extendedleaps::qfdata*, bool, bool&, double)' was hidden [-Woverloaded-virtual=] 50 | virtual void pivot(direction dir,mindices& mmind,vind vp,vind t,partialqfdata* pdt,qfdata* fdt, | ^~~~~ VSQforms.h:35:22: note: by 'extendedleaps::vsqfdata::pivot' 35 | void pivot(direction dir,lagindex& prtmmit,vind vp,vind t,vind dim,partialvsqfdata* newpdata,vsqfdata* newfdata | ^~~~~ g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c Gstatma.cpp -o Gstatma.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c MStcrt.cpp -o MStcrt.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c NewtonRp.cpp -o NewtonRp.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c Qforms.cpp -o Qforms.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c RMcrt.cpp -o RMcrt.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c RVcrt.cpp -o RVcrt.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c Rnk3CCRcrt.cpp -o Rnk3CCRcrt.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c SRI_sscma.cpp -o SRI_sscma.o In file included from SRI_sscma.h:2, from SRI_sscma.cpp:2: SRI_sscma.cpp: In function 'SEXPREC* eleaps(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)': SRI_sscma.cpp:28:27: error: 'allocVector' was not declared in this scope; did you mean 'Rf_allocVector'? 28 | PROTECT(subsets = allocVector(INTSXP,nsol1*kmax1*klength)); | ^~~~~~~~~~~ /data/gannet/ripley/R/R-devel/include/Rinternals.h:371:36: note: in definition of macro 'PROTECT' 371 | #define PROTECT(s) Rf_protect(s) | ^ SRI_sscma.cpp:78:32: error: 'ScalarInteger' was not declared in this scope; did you mean 'Rf_ScalarInteger'? 78 | SET_VECTOR_ELT(ans, 4, ScalarInteger(optimal)); | ^~~~~~~~~~~~~ | Rf_ScalarInteger SRI_sscma.cpp:82:38: error: 'mkChar' was not declared in this scope 82 | SET_STRING_ELT(ans_names, 0, mkChar("subsets")); | ^~~~~~ SRI_sscma.cpp:88:9: error: 'setAttrib' was not declared in this scope; did you mean 'Rf_setAttrib'? 88 | setAttrib(ans, R_NamesSymbol, ans_names); | ^~~~~~~~~ | Rf_setAttrib make[2]: *** [/data/gannet/ripley/R/R-devel/etc/Makeconf:202: SRI_sscma.o] Error 1 make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-noRemap/subselect/src' ERROR: compilation failed for package ‘subselect’ * removing ‘/data/gannet/ripley/R/packages/tests-noRemap/Libs/subselect-lib/subselect’ Command exited with non-zero status 1 Time 0:30.30, 27.14 + 1.86