* installing *source* package ‘oaqc’ ...
** package ‘oaqc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
using C++11
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-noRemap/oaqc/src'
g++-13 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c Graph.cpp -o Graph.o
g++-13 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c QuadCensus.cpp -o QuadCensus.o
g++-13 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c init.cpp -o init.o
In file included from init.cpp:6:
init.cpp: In function 'SEXPREC* c_to_r(const unsigned int*, const long unsigned int*, unsigned int, long unsigned int)':
init.cpp:15:29: error: 'allocVector' was not declared in this scope; did you mean 'Rf_allocVector'?
   15 |         SEXP rvec = PROTECT(allocVector(REALSXP, len));
      |                             ^~~~~~~~~~~
/data/gannet/ripley/R/R-devel/include/Rinternals.h:371:36: note: in definition of macro 'PROTECT'
  371 | #define PROTECT(s)      Rf_protect(s)
      |                                    ^
init.cpp:20:9: error: 'setAttrib' was not declared in this scope; did you mean 'Rf_setAttrib'?
   20 |         setAttrib(rvec, R_DimSymbol, dim);
      |         ^~~~~~~~~
      |         Rf_setAttrib
init.cpp: In function 'void write_results(SEXPREC*&, SEXPREC*&, unsigned int&, unsigned int, unsigned int, oaqc::QuadCensus&, std::string&, std::string)':
init.cpp:77:41: error: 'mkChar' was not declared in this scope
   77 |         SET_STRING_ELT(a_names, sIndex, mkChar(("n_orbits_" + rType).c_str()));
      |                                         ^~~~~~
init.cpp: In function 'SEXPREC* entry(SEXP, SEXP, SEXP, SEXP)':
init.cpp:89:32: error: 'length' was not declared in this scope
   89 |         const unsigned int m = length(a_edges) / 2;
      |                                ^~~~~~
init.cpp:102:30: error: 'allocVector' was not declared in this scope; did you mean 'Rf_allocVector'?
  102 |         SEXP value = PROTECT(allocVector(VECSXP, res_size)); // VECSXP == list
      |                              ^~~~~~~~~~~
/data/gannet/ripley/R/R-devel/include/Rinternals.h:371:36: note: in definition of macro 'PROTECT'
  371 | #define PROTECT(s)      Rf_protect(s)
      |                                    ^
init.cpp:115:9: error: 'setAttrib' was not declared in this scope; did you mean 'Rf_setAttrib'?
  115 |         setAttrib(value, R_NamesSymbol, names);
      |         ^~~~~~~~~
      |         Rf_setAttrib
make[2]: *** [/data/gannet/ripley/R/R-devel/etc/Makeconf:202: init.o] Error 1
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-noRemap/oaqc/src'
ERROR: compilation failed for package ‘oaqc’
* removing ‘/data/gannet/ripley/R/packages/tests-noRemap/Libs/oaqc-lib/oaqc’
Command exited with non-zero status 1
Time 0:04.12, 3.61 + 0.35