* installing *source* package ‘naryn’ ... ** package ‘naryn’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (GCC) 13.2.0’ make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-noRemap/naryn/src' g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c BinFinder.cpp -o BinFinder.o g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c BinsManager.cpp -o BinsManager.o BinsManager.cpp: In constructor 'BinsManager::BinsManager(SEXP, SEXP, SEXP, const std::vector >*, const NRTrackExpressionVars*)': BinsManager.cpp:7:14: error: 'isVector' was not declared in this scope; did you mean 'Rf_isVector'? 7 | if (!isVector(_breaks)){ | ^~~~~~~~ | Rf_isVector BinsManager.cpp:11:14: error: 'isLogical' was not declared in this scope; did you mean 'Rf_isLogical'? 11 | if (!isLogical(_include_lowest) || Rf_length(_include_lowest) != 1){ | ^~~~~~~~~ | Rf_isLogical BinsManager.cpp:15:10: error: 'isLogical' was not declared in this scope; did you mean 'Rf_isLogical'? 15 | if (!isLogical(_right) || Rf_length(_right) != 1){ | ^~~~~~~~~ | Rf_isLogical BinsManager.cpp:21:28: error: 'asLogical' was not declared in this scope; did you mean 'Rf_asLogical'? 21 | m_include_lowest = asLogical(_include_lowest); | ^~~~~~~~~ | Rf_asLogical BinsManager.cpp:31:36: error: 'isNull' was not declared in this scope 31 | if ((expr_vars && !isNull(breaks) && !isReal(breaks) && !isInteger(breaks)) || (!expr_vars && !isReal(breaks) && !isInteger(breaks))){ | ^~~~~~ BinsManager.cpp:31:55: error: 'isReal' was not declared in this scope 31 | if ((expr_vars && !isNull(breaks) && !isReal(breaks) && !isInteger(breaks)) || (!expr_vars && !isReal(breaks) && !isInteger(breaks))){ | ^~~~~~ BinsManager.cpp:31:74: error: 'isInteger' was not declared in this scope; did you mean 'Rf_isInteger'? 31 | if ((expr_vars && !isNull(breaks) && !isReal(breaks) && !isInteger(breaks)) || (!expr_vars && !isReal(breaks) && !isInteger(breaks))){ | ^~~~~~~~~ | Rf_isInteger BinsManager.cpp:37:21: error: 'isInteger' was not declared in this scope; did you mean 'Rf_isInteger'? 37 | if (isInteger(breaks)) { | ^~~~~~~~~ | Rf_isInteger BinsManager.cpp:43:28: error: 'isReal' was not declared in this scope 43 | } else if (isReal(breaks)) | ^~~~~~ BinsManager.cpp: In member function 'void BinsManager::set_dims(SEXP, SEXP, SEXP) const': BinsManager.cpp:97:62: error: 'mkChar' was not declared in this scope 97 | SET_STRING_ELT(dimname, ival - vals.begin(), mkChar(buf)); | ^~~~~~ BinsManager.cpp:114:52: error: 'mkChar' was not declared in this scope 114 | SET_STRING_ELT(dimname, j, mkChar(buf)); | ^~~~~~ make[2]: *** [/data/gannet/ripley/R/R-devel/etc/Makeconf:202: BinsManager.o] Error 1 make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-noRemap/naryn/src' ERROR: compilation failed for package ‘naryn’ * removing ‘/data/gannet/ripley/R/packages/tests-noRemap/Libs/naryn-lib/naryn’ Command exited with non-zero status 1 Time 0:06.00, 5.07 + 0.58