* installing *source* package ‘crs’ ...
** package ‘crs’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-noRemap/crs/src'
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c RuniqueCombs.c -o RuniqueCombs.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c bspline.c -o bspline.o
gcc-13 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c gsl_bspline.c -o gsl_bspline.o
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include   -I./nomad_src -I./sgtelib_src -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c snomadr.cpp -o snomadr.o
In file included from ./nomad_src/Direction.hpp:54,
                 from ./nomad_src/Directions.hpp:55,
                 from ./nomad_src/Variable_Group.hpp:54,
                 from ./nomad_src/Signature.hpp:54,
                 from ./nomad_src/Parameters.hpp:59,
                 from ./nomad_src/Eval_Point.hpp:54,
                 from ./nomad_src/Cache_Point.hpp:54,
                 from ./nomad_src/Cache.hpp:63,
                 from ./nomad_src/Barrier.hpp:54,
                 from ./nomad_src/Evaluator_Control.hpp:54,
                 from ./nomad_src/Search.hpp:53,
                 from ./nomad_src/Quad_Model_Evaluator.hpp:54,
                 from ./nomad_src/Single_Obj_Quad_Model_Evaluator.hpp:55,
                 from ./nomad_src/Quad_Model_Search.hpp:55,
                 from ./nomad_src/Mads.hpp:54,
                 from ./nomad_src/nomad.hpp:53,
                 from snomadr.h:51,
                 from snomadr.cpp:32:
./nomad_src/Point.hpp:435:22: warning: 'virtual bool NOMAD::Point::operator<(const NOMAD::Point&) const' was hidden [-Woverloaded-virtual=]
  435 |         virtual bool operator <  ( const Point & p ) const;
      |                      ^~~~~~~~
./nomad_src/Eval_Point.hpp:463:14: note:   by 'bool NOMAD::Eval_Point::operator<(const NOMAD::Eval_Point&) const'
  463 |         bool operator < ( const Eval_Point & x ) const;
      |              ^~~~~~~~
snomadr.cpp: In function 'SEXPREC* getListElement(SEXP, std::string)':
snomadr.cpp:54:49: error: 'getAttrib' was not declared in this scope; did you mean 'Rf_getAttrib'?
   54 |                 SEXP elmt = R_NilValue, names = getAttrib(list, R_NamesSymbol);
      |                                                 ^~~~~~~~~
      |                                                 Rf_getAttrib
snomadr.cpp:56:33: error: 'length' was not declared in this scope
   56 |                 for (i = 0; i < length(list); i++)
      |                                 ^~~~~~
snomadr.cpp: In function 'void setApplicationOptions(NOMAD::Parameters&, SEXP)':
snomadr.cpp:96:38: error: 'getAttrib' was not declared in this scope; did you mean 'Rf_getAttrib'?
   96 |                 opts_integer_names = getAttrib(opts_integer, R_NamesSymbol);
      |                                      ^~~~~~~~~
      |                                      Rf_getAttrib
snomadr.cpp:97:46: error: 'length' was not declared in this scope
   97 |                 for (int list_cnt=0;list_cnt<length( opts_integer );list_cnt++) {
      |                                              ^~~~~~
snomadr.cpp:111:46: error: 'length' was not declared in this scope
  111 |                 for (int list_cnt=0;list_cnt<length( opts_numeric );list_cnt++) {
      |                                              ^~~~~~
snomadr.cpp:126:46: error: 'length' was not declared in this scope
  126 |                 for (int list_cnt=0;list_cnt<length( opts_string );list_cnt++) {
      |                                              ^~~~~~
snomadr.cpp: In function 'SEXPREC* showArgs1(SEXP)':
snomadr.cpp:150:34: error: 'getAttrib' was not declared in this scope; did you mean 'Rf_getAttrib'?
  150 |                 SEXP el, names = getAttrib(largs, R_NamesSymbol);
      |                                  ^~~~~~~~~
      |                                  Rf_getAttrib
snomadr.cpp:155:40: error: 'isNull' was not declared in this scope
  155 |                                 name = isNull(names) ? "" : CHAR(STRING_ELT(names, i));
      |                                        ^~~~~~
In file included from /data/gannet/ripley/R/R-devel/include/Rdefines.h:41,
                 from snomadr.h:54:
snomadr.cpp: In function 'double* eval_f(int, int, double*)':
snomadr.cpp:189:33: error: 'allocVector' was not declared in this scope; did you mean 'Rf_allocVector'?
  189 |                 PROTECT(rargs = allocVector(REALSXP,n));
      |                                 ^~~~~~~~~~~
/data/gannet/ripley/R/R-devel/include/Rinternals.h:371:36: note: in definition of macro 'PROTECT'
  371 | #define PROTECT(s)      Rf_protect(s)
      |                                    ^
snomadr.cpp:195:33: error: 'lang2' was not declared in this scope
  195 |                 PROTECT(Rcall = lang2(thefun,rargs));
      |                                 ^~~~~
/data/gannet/ripley/R/R-devel/include/Rinternals.h:371:36: note: in definition of macro 'PROTECT'
  371 | #define PROTECT(s)      Rf_protect(s)
      |                                    ^
snomadr.cpp:196:34: error: 'eval' was not declared in this scope
  196 |                 PROTECT(result = eval(Rcall,theenv));
      |                                  ^~~~
/data/gannet/ripley/R/R-devel/include/Rinternals.h:371:36: note: in definition of macro 'PROTECT'
  371 | #define PROTECT(s)      Rf_protect(s)
      |                                    ^
snomadr.cpp: In function 'SEXPREC* print_solution(double, double*, int, int, int, int, NOMAD::stop_type)':
snomadr.cpp:254:41: error: 'allocVector' was not declared in this scope; did you mean 'Rf_allocVector'?
  254 |                 PROTECT(R_result_list = allocVector(VECSXP, num_return_elements));
      |                                         ^~~~~~~~~~~
/data/gannet/ripley/R/R-devel/include/Rinternals.h:371:36: note: in definition of macro 'PROTECT'
  371 | #define PROTECT(s)      Rf_protect(s)
      |                                    ^
snomadr.cpp:260:42: error: 'mkChar' was not declared in this scope
  260 |                 SET_STRING_ELT(names, 0, mkChar("status"));
      |                                          ^~~~~~
snomadr.cpp:266:17: error: 'setAttrib' was not declared in this scope; did you mean 'Rf_setAttrib'?
  266 |                 setAttrib(R_result_list, R_NamesSymbol, names);
      |                 ^~~~~~~~~
      |                 Rf_setAttrib
snomadr.cpp: In function 'SEXPREC* snomadRInfo(SEXP)':
snomadr.cpp:343:51: error: 'isNull' was not declared in this scope
  343 |                                 string strinfo =  isNull(sinfo) ? "" : CHAR(STRING_ELT(sinfo, 0));
      |                                                   ^~~~~~
snomadr.cpp: In function 'SEXPREC* snomadRSolve(SEXP)':
snomadr.cpp:533:50: error: 'error' was not declared in this scope; did you mean 'perror'?
  533 |                                                  error("\nNOMAD has been interrupted ( %s )\n\n",  e.what() );
      |                                                  ^~~~~
      |                                                  perror
snomadr.cpp: In function 'SEXPREC* smultinomadRSolve(SEXP)':
snomadr.cpp:635:36: error: 'isNull' was not declared in this scope
  635 |                                 if(isNull(rseed))
      |                                    ^~~~~~
snomadr.cpp:716:46: error: 'isNull' was not declared in this scope
  716 |                                          if(!isNull(sx0))
      |                                              ^~~~~~
snomadr.cpp:884:49: error: 'error' was not declared in this scope; did you mean 'perror'?
  884 |                                                 error("\nNOMAD has been interrupted ( %s )\n\n",  e.what());
      |                                                 ^~~~~
      |                                                 perror
make[2]: *** [/data/gannet/ripley/R/R-devel/etc/Makeconf:202: snomadr.o] Error 1
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-noRemap/crs/src'
ERROR: compilation failed for package ‘crs’
* removing ‘/data/gannet/ripley/R/packages/tests-noRemap/Libs/crs-lib/crs’
Command exited with non-zero status 1
Time 0:07.58, 5.54 + 0.58