* installing *source* package ‘LipidMS’ ...
** package ‘LipidMS’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (GCC) 13.2.0’
using C++ compiler: ‘g++-13 (GCC) 13.2.0’
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-noRemap/LipidMS/src'
g++-13 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c Peakpicking.cpp -o Peakpicking.o
In file included from /data/gannet/ripley/R/R-devel/include/Rdefines.h:41,
                 from Peakpicking.cpp:11:
Peakpicking.cpp: In function 'SEXPREC* indexed(SEXP, SEXP, SEXP, SEXP, SEXP)':
Peakpicking.cpp:199:29: error: 'allocMatrix' was not declared in this scope; did you mean 'Rf_allocMatrix'?
  199 |             PROTECT(outit = allocMatrix(INTSXP, maxind, 3));
      |                             ^~~~~~~~~~~
/data/gannet/ripley/R/R-devel/include/Rinternals.h:371:36: note: in definition of macro 'PROTECT'
  371 | #define PROTECT(s)      Rf_protect(s)
      |                                    ^
Peakpicking.cpp: In function 'SEXPREC* getEIC(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
Peakpicking.cpp:318:44: error: 'allocMatrix' was not declared in this scope; did you mean 'Rf_allocMatrix'?
  318 |                         PROTECT(clusters = allocMatrix(REALSXP, leng, 13));
      |                                            ^~~~~~~~~~~
/data/gannet/ripley/R/R-devel/include/Rinternals.h:371:36: note: in definition of macro 'PROTECT'
  371 | #define PROTECT(s)      Rf_protect(s)
      |                                    ^
Peakpicking.cpp: In function 'SEXPREC* gapfill(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
Peakpicking.cpp:716:39: error: 'allocMatrix' was not declared in this scope; did you mean 'Rf_allocMatrix'?
  716 |                         PROTECT(ans = allocMatrix(REALSXP, leng3, 10));
      |                                       ^~~~~~~~~~~
/data/gannet/ripley/R/R-devel/include/Rinternals.h:371:36: note: in definition of macro 'PROTECT'
  371 | #define PROTECT(s)      Rf_protect(s)
      |                                    ^
make[2]: *** [/data/gannet/ripley/R/R-devel/etc/Makeconf:202: Peakpicking.o] Error 1
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-noRemap/LipidMS/src'
ERROR: compilation failed for package ‘LipidMS’
* removing ‘/data/gannet/ripley/R/packages/tests-noRemap/Libs/LipidMS-lib/LipidMS’
Command exited with non-zero status 1
Time 0:02.13, 1.60 + 0.26