* using log directory ‘/data/blackswan/ripley/R/packages/tests-vg/R2Cuba.Rcheck’ * using R Under development (unstable) (2018-07-01 r74950) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using options ‘--use-valgrind --no-stop-on-test-error’ * checking for file ‘R2Cuba/DESCRIPTION’ ... OK * this is package ‘R2Cuba’ version ‘1.1-0’ * package encoding: UTF-8 * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package ‘R2Cuba’ can be installed ... OK * checking package directory ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking compiled code ... OK * checking examples ... [30s/31s] OK * checking tests ... [551s/554s] OK Running ‘Gtilde2.R’ [17s/17s] Comparing ‘Gtilde2.Rout’ to ‘Gtilde2.Rout.save’ ...1,5d0 < ==23512== Memcheck, a memory error detector < ==23512== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. < ==23512== Using Valgrind-3.13.0 and LibVEX; rerun with -h for copyright info < ==23512== Command: /data/blackswan/ripley/R/R-devel-vg/bin/exec/R -f Gtilde2.R --restore --save --no-readline --vanilla < ==23512== 413,431d407 < > proc.time() < user system elapsed < 15.218 0.230 14.351 < ==23512== < ==23512== HEAP SUMMARY: < ==23512== in use at exit: 55,938,192 bytes in 11,644 blocks < ==23512== total heap usage: 24,176 allocs, 12,532 frees, 80,484,610 bytes allocated < ==23512== < ==23512== LEAK SUMMARY: < ==23512== definitely lost: 0 bytes in 0 blocks < ==23512== indirectly lost: 0 bytes in 0 blocks < ==23512== possibly lost: 0 bytes in 0 blocks < ==23512== still reachable: 55,938,192 bytes in 11,644 blocks < ==23512== suppressed: 0 bytes in 0 blocks < ==23512== Reachable blocks (those to which a pointer was found) are not shown. < ==23512== To see them, rerun with: --leak-check=full --show-leak-kinds=all < ==23512== < ==23512== For counts of detected and suppressed errors, rerun with: -v < ==23512== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 0 from 0) Running ‘MWE.R’ [388s/390s] Comparing ‘MWE.Rout’ to ‘MWE.Rout.save’ ...1,5d0 < ==23669== Memcheck, a memory error detector < ==23669== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. < ==23669== Using Valgrind-3.13.0 and LibVEX; rerun with -h for copyright info < ==23669== Command: /data/blackswan/ripley/R/R-devel-vg/bin/exec/R -f MWE.R --restore --save --no-readline --vanilla < ==23669== 78,96d72 < > proc.time() < user system elapsed < 384.233 2.687 387.649 < ==23669== < ==23669== HEAP SUMMARY: < ==23669== in use at exit: 49,666,938 bytes in 9,497 blocks < ==23669== total heap usage: 68,680 allocs, 59,183 frees, 348,586,918 bytes allocated < ==23669== < ==23669== LEAK SUMMARY: < ==23669== definitely lost: 0 bytes in 0 blocks < ==23669== indirectly lost: 0 bytes in 0 blocks < ==23669== possibly lost: 0 bytes in 0 blocks < ==23669== still reachable: 49,666,938 bytes in 9,497 blocks < ==23669== suppressed: 0 bytes in 0 blocks < ==23669== Reachable blocks (those to which a pointer was found) are not shown. < ==23669== To see them, rerun with: --leak-check=full --show-leak-kinds=all < ==23669== < ==23669== For counts of detected and suppressed errors, rerun with: -v < ==23669== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 0 from 0) Running ‘cuhre.R’ [17s/17s] Comparing ‘cuhre.Rout’ to ‘cuhre.Rout.save’ ...1,5d0 < ==26964== Memcheck, a memory error detector < ==26964== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. < ==26964== Using Valgrind-3.13.0 and LibVEX; rerun with -h for copyright info < ==26964== Command: /data/blackswan/ripley/R/R-devel-vg/bin/exec/R -f cuhre.R --restore --save --no-readline --vanilla < ==26964== 94,112d88 < > proc.time() < user system elapsed < 15.537 0.277 14.705 < ==26964== < ==26964== HEAP SUMMARY: < ==26964== in use at exit: 51,264,390 bytes in 9,453 blocks < ==26964== total heap usage: 24,517 allocs, 15,064 frees, 83,145,212 bytes allocated < ==26964== < ==26964== LEAK SUMMARY: < ==26964== definitely lost: 0 bytes in 0 blocks < ==26964== indirectly lost: 0 bytes in 0 blocks < ==26964== possibly lost: 0 bytes in 0 blocks < ==26964== still reachable: 51,264,390 bytes in 9,453 blocks < ==26964== suppressed: 0 bytes in 0 blocks < ==26964== Reachable blocks (those to which a pointer was found) are not shown. < ==26964== To see them, rerun with: --leak-check=full --show-leak-kinds=all < ==26964== < ==26964== For counts of detected and suppressed errors, rerun with: -v < ==26964== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 0 from 0) Running ‘divonne.R’ [40s/41s] Comparing ‘divonne.Rout’ to ‘divonne.Rout.save’ ...1,5d0 < ==27055== Memcheck, a memory error detector < ==27055== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. < ==27055== Using Valgrind-3.13.0 and LibVEX; rerun with -h for copyright info < ==27055== Command: /data/blackswan/ripley/R/R-devel-vg/bin/exec/R -f divonne.R --restore --save --no-readline --vanilla < ==27055== 572,590d566 < > proc.time() < user system elapsed < 38.579 0.390 37.914 < ==27055== < ==27055== HEAP SUMMARY: < ==27055== in use at exit: 53,987,664 bytes in 9,773 blocks < ==27055== total heap usage: 25,546 allocs, 15,773 frees, 424,459,982 bytes allocated < ==27055== < ==27055== LEAK SUMMARY: < ==27055== definitely lost: 0 bytes in 0 blocks < ==27055== indirectly lost: 0 bytes in 0 blocks < ==27055== possibly lost: 0 bytes in 0 blocks < ==27055== still reachable: 53,987,664 bytes in 9,773 blocks < ==27055== suppressed: 0 bytes in 0 blocks < ==27055== Reachable blocks (those to which a pointer was found) are not shown. < ==27055== To see them, rerun with: --leak-check=full --show-leak-kinds=all < ==27055== < ==27055== For counts of detected and suppressed errors, rerun with: -v < ==27055== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 0 from 0) Running ‘peak.R’ [20s/20s] Comparing ‘peak.Rout’ to ‘peak.Rout.save’ ...1,5d0 < ==27946== Memcheck, a memory error detector < ==27946== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. < ==27946== Using Valgrind-3.13.0 and LibVEX; rerun with -h for copyright info < ==27946== Command: /data/blackswan/ripley/R/R-devel-vg/bin/exec/R -f peak.R --restore --save --no-readline --vanilla < ==27946== 74,92d68 < > proc.time() < user system elapsed < 18.460 0.211 17.541 < ==27946== < ==27946== HEAP SUMMARY: < ==27946== in use at exit: 53,530,797 bytes in 10,045 blocks < ==27946== total heap usage: 25,744 allocs, 15,699 frees, 145,635,699 bytes allocated < ==27946== < ==27946== LEAK SUMMARY: < ==27946== definitely lost: 0 bytes in 0 blocks < ==27946== indirectly lost: 0 bytes in 0 blocks < ==27946== possibly lost: 0 bytes in 0 blocks < ==27946== still reachable: 53,530,797 bytes in 10,045 blocks < ==27946== suppressed: 0 bytes in 0 blocks < ==27946== Reachable blocks (those to which a pointer was found) are not shown. < ==27946== To see them, rerun with: --leak-check=full --show-leak-kinds=all < ==27946== < ==27946== For counts of detected and suppressed errors, rerun with: -v < ==27946== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 0 from 0) Running ‘suave.R’ [22s/22s] Comparing ‘suave.Rout’ to ‘suave.Rout.save’ ...1,5d0 < ==28012== Memcheck, a memory error detector < ==28012== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. < ==28012== Using Valgrind-3.13.0 and LibVEX; rerun with -h for copyright info < ==28012== Command: /data/blackswan/ripley/R/R-devel-vg/bin/exec/R -f suave.R --restore --save --no-readline --vanilla < ==28012== 92,105d86 < ==28012== Source and destination overlap in mempcpy(0x11a357f5, 0x11a35858, 100) < ==28012== at 0x4C35120: __GI_mempcpy (/builddir/build/BUILD/valgrind-3.13.0/memcheck/../shared/vg_replace_strmem.c:1525) < ==28012== by 0x759A7EB: _IO_default_xsputn (in /usr/lib64/libc-2.25.so) < ==28012== by 0x7567A3D: printf_positional (in /usr/lib64/libc-2.25.so) < ==28012== by 0x7569FD9: vfprintf (in /usr/lib64/libc-2.25.so) < ==28012== by 0x758DC80: vsprintf (in /usr/lib64/libc-2.25.so) < ==28012== by 0x7571863: sprintf (in /usr/lib64/libc-2.25.so) < ==28012== by 0x1529D45F: suaveSample (packages/tests-vg/R2Cuba/src/suave_Sample.c:172) < ==28012== by 0x1529C230: suaveIntegrate (packages/tests-vg/R2Cuba/src/suave_Integrate.c:225) < ==28012== by 0x1529D9E4: Suave (packages/tests-vg/R2Cuba/src/suave_Suave.c:90) < ==28012== by 0x49C0EC: do_dotCode (svn/R-devel/src/main/dotcode.c:1838) < ==28012== by 0x4CC357: bcEval (svn/R-devel/src/main/eval.c:6785) < ==28012== by 0x4DA76F: Rf_eval (svn/R-devel/src/main/eval.c:624) < ==28012== 177,195d157 < > proc.time() < user system elapsed < 19.948 0.339 19.266 < ==28012== < ==28012== HEAP SUMMARY: < ==28012== in use at exit: 53,273,758 bytes in 9,644 blocks < ==28012== total heap usage: 24,808 allocs, 15,164 frees, 84,690,948 bytes allocated < ==28012== < ==28012== LEAK SUMMARY: < ==28012== definitely lost: 0 bytes in 0 blocks < ==28012== indirectly lost: 0 bytes in 0 blocks < ==28012== possibly lost: 0 bytes in 0 blocks < ==28012== still reachable: 53,273,758 bytes in 9,644 blocks < ==28012== suppressed: 0 bytes in 0 blocks < ==28012== Reachable blocks (those to which a pointer was found) are not shown. < ==28012== To see them, rerun with: --leak-check=full --show-leak-kinds=all < ==28012== < ==28012== For counts of detected and suppressed errors, rerun with: -v < ==28012== ERROR SUMMARY: 7 errors from 1 contexts (suppressed: 0 from 0) Running ‘vegas.R’ [47s/47s] * DONE Status: OK