* using log directory ‘/data/gannet/ripley/R/packages/tests-gcc-SAN/rflann.Rcheck’
* using R Under development (unstable) (2018-06-02 r74838)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘rflann/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘rflann’ version ‘1.3’
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package ‘rflann’ can be installed ... [233s/128s] OK
* checking package directory ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking compiled code ... OK
* checking examples ... ERROR
Running examples in ‘rflann-Ex.R’ failed
The error most likely occurred in:

> ### Name: Neighbour
> ### Title: K nearest neighbours
> ### Aliases: Neighbour
> 
> ### ** Examples
> 
> ## Find the nearest neighbour using a KD Tree
> query <- matrix(rnorm(10), ncol = 2)
> reference <- matrix(rnorm(10), ncol = 2)
> Neighbour(query, reference, 3, "kdtree", 0, 1)
=================================================================
==9282==ERROR: AddressSanitizer: stack-use-after-scope on address 0x7ffc09800a10 at pc 0x7f43e8425ae1 bp 0x7ffc09800870 sp 0x7ffc09800860
READ of size 4 at 0x7ffc09800a10 thread T0
    #0 0x7f43e8425ae0 in flann::flann_algorithm_t flann::get_param<flann::flann_algorithm_t>(std::map<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, flann::any, std::less<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::allocator<std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const, flann::any> > > const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >) flann/util/params.h:111
    #1 0x7f43e8463345 in flann::Index<flann::L2<double> >::Index(flann::Matrix<double> const&, std::map<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, flann::any, std::less<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::allocator<std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const, flann::any> > > const&, flann::L2<double>) flann/flann.hpp:104
    #2 0x7f43e83e490b in Neighbour(Rcpp::Matrix<14, Rcpp::PreserveStorage>, Rcpp::Matrix<14, Rcpp::PreserveStorage>, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, int, int) /data/gannet/ripley/R/packages/tests-gcc-SAN/rflann/src/neighbour.cpp:41
    #3 0x7f43e83eb016 in rflann_Neighbour /data/gannet/ripley/R/packages/tests-gcc-SAN/rflann/src/neighbour.cpp:79
    #4 0x5797a0 in do_dotcall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:1252
    #5 0x6198d4 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6776
    #6 0x645717 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624
    #7 0x64a845 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1768
    #8 0x645c06 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:747
    #9 0x6b98ae in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:258
    #10 0x6ba290 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:308
    #11 0x6bb9a4 in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1082
    #12 0x421198 in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29
    #13 0x7f43f61b8889 in __libc_start_main (/lib64/libc.so.6+0x20889)
    #14 0x423899 in _start (/data/gannet/ripley/R/gcc-SAN/bin/exec/R+0x423899)

Address 0x7ffc09800a10 is located in stack of thread T0 at offset 352 in frame
    #0 0x7f43e842550f in flann::flann_algorithm_t flann::get_param<flann::flann_algorithm_t>(std::map<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, flann::any, std::less<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::allocator<std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const, flann::any> > > const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >) flann/util/params.h:107

  This frame has 10 object(s):
    [32, 33) '<unknown>'
    [96, 97) '<unknown>'
    [160, 168) 'it'
    [224, 232) '<unknown>'
    [288, 296) '<unknown>'
    [352, 360) 'obj' <== Memory access at offset 352 is inside this variable
    [416, 448) '<unknown>'
    [480, 512) '<unknown>'
    [544, 576) '<unknown>'
    [608, 640) '<unknown>'
HINT: this may be a false positive if your program uses some custom stack unwind mechanism or swapcontext
      (longjmp and C++ exceptions *are* supported)
SUMMARY: AddressSanitizer: stack-use-after-scope flann/util/params.h:111 in flann::flann_algorithm_t flann::get_param<flann::flann_algorithm_t>(std::map<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, flann::any, std::less<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::allocator<std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const, flann::any> > > const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >)
Shadow bytes around the buggy address:
  0x1000012f80f0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
  0x1000012f8100: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
  0x1000012f8110: 00 00 00 00 00 00 f1 f1 f1 f1 01 f2 f2 f2 f2 f2
  0x1000012f8120: f2 f2 01 f2 f2 f2 f2 f2 f2 f2 00 f2 f2 f2 f2 f2
  0x1000012f8130: f2 f2 f8 f2 f2 f2 f2 f2 f2 f2 f8 f2 f2 f2 f2 f2
=>0x1000012f8140: f2 f2[f8]f2 f2 f2 f2 f2 f2 f2 00 00 00 00 f2 f2
  0x1000012f8150: f2 f2 00 00 00 00 f2 f2 f2 f2 00 00 00 00 f2 f2
  0x1000012f8160: f2 f2 00 00 00 00 f3 f3 f3 f3 00 00 00 00 00 00
  0x1000012f8170: 00 00 00 00 00 00 00 00 00 00 f1 f1 f1 f1 01 f2
  0x1000012f8180: f2 f2 f2 f2 f2 f2 01 f2 f2 f2 f2 f2 f2 f2 01 f2
  0x1000012f8190: f2 f2 f2 f2 f2 f2 00 00 00 00 f2 f2 f2 f2 00 00
Shadow byte legend (one shadow byte represents 8 application bytes):
  Addressable:           00
  Partially addressable: 01 02 03 04 05 06 07 
  Heap left redzone:       fa
  Freed heap region:       fd
  Stack left redzone:      f1
  Stack mid redzone:       f2
  Stack right redzone:     f3
  Stack after return:      f5
  Stack use after scope:   f8
  Global redzone:          f9
  Global init order:       f6
  Poisoned by user:        f7
  Container overflow:      fc
  Array cookie:            ac
  Intra object redzone:    bb
  ASan internal:           fe
  Left alloca redzone:     ca
  Right alloca redzone:    cb
==9282==ABORTING
* DONE
Status: 1 ERROR