* using log directory ‘/data/gannet/ripley/R/packages/tests-clang-SAN/QPot.Rcheck’
* using R Under development (unstable) (2019-09-07 r77160)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘QPot/DESCRIPTION’ ... OK
* this is package ‘QPot’ version ‘1.5’
* checking package dependencies ... NOTE
Package suggested but not available for checking: ‘phaseR’
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package ‘QPot’ can be installed ... [19s/53s] OK
* checking package directory ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking compiled code ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [29s/63s] OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking re-building of vignette outputs ... [19s/23s] WARNING
Error(s) in re-building vignettes:
--- re-building ‘QPot_Rarticle.pdf.asis’ using asis
--- finished re-building ‘QPot_Rarticle.pdf.asis’

--- re-building ‘QPot_Example1.md.rsp’ using rsp
Loading required package: QPot
Loading required package: R.devices
R.devices v2.16.0 (2018-07-21) successfully loaded. See ?R.devices for help.
Loading required package: R.rsp
R.rsp v0.43.1 (2019-02-06) successfully loaded. See ?R.rsp for help.

Attaching package: ‘R.rsp’

The following object is masked from ‘package:base’:

    write

Note: This function is supplied to help convert equations to strings.  Long equations, equations spanning multiple lines, equations with strange notation, etc, may not work.  Always check the output.
Note: This function is supplied to help convert equations to strings.  Long equations, equations spanning multiple lines, equations with strange notation, etc, may not work.  Always check the output.
Loading required package: phaseR
Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,  :
  there is no package called ‘phaseR’
Error: processing vignette 'QPot_Example1.md.rsp' failed with diagnostics:
could not find function "flowField"
--- failed re-building ‘QPot_Example1.md.rsp’

--- re-building ‘QPot_Example2.md.rsp’ using rsp
Loading required package: QPot
Loading required package: R.devices
R.devices v2.16.0 (2018-07-21) successfully loaded. See ?R.devices for help.
Loading required package: R.rsp
R.rsp v0.43.1 (2019-02-06) successfully loaded. See ?R.rsp for help.

Attaching package: ‘R.rsp’

The following object is masked from ‘package:base’:

    write

Loading required package: viridis
Loading required package: viridisLite
Loading required package: phaseR
Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,  :
  there is no package called ‘phaseR’
Error: processing vignette 'QPot_Example2.md.rsp' failed with diagnostics:
could not find function "flowField"
--- failed re-building ‘QPot_Example2.md.rsp’

SUMMARY: processing the following files failed:
  ‘QPot_Example1.md.rsp’ ‘QPot_Example2.md.rsp’

Error: Vignette re-building failed.
Execution halted

* checking for detritus in the temp directory ... OK
* DONE
Status: 1 WARNING, 1 NOTE