* using log directory ‘/data/gannet/ripley/R/packages/tests-flang2/poissonMT.Rcheck’
* using R Under development (unstable) (2023-07-22 r84729)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    clang version 17.0.0 (https://github.com/llvm/llvm-project.git b69d4a4fb707e1623a694d4a2c8fdfa1d8d69a06)
    flang-new version 17.0.0 (https://github.com/llvm/llvm-project.git b69d4a4fb707e1623a694d4a2c8fdfa1d8d69a06)
* running under: Fedora Linux 36 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘poissonMT/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘poissonMT’ version ‘0.3-5’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘poissonMT’ can be installed ... [8s/31s] OK
* used C compiler: ‘clang version 17.0.0 (https://github.com/llvm/llvm-project.git 78d91df452d669570e120cb5c3d5febf7f17475d)’
* used Fortran compiler: ‘flang-new version 17.0.0 (https://github.com/llvm/llvm-project.git 78d91df452d669570e120cb5c3d5febf7f17475d)’
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [13s/39s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... [3s/46s] ERROR
Running examples in ‘poissonMT-Ex.R’ failed
The error most likely occurred in:

> ### Name: glmrobMT
> ### Title: Robust Fitting of Poisson Generalized Linear Models using MT
> ###   robust method
> ### Aliases: glmrobMT
> ### Keywords: robust regression nonlinear
> 
> ### ** Examples
> 
>   data(epilepsy)  
>   Efit1 <- glm(Ysum ~ Age10 + Base4*Trt, family=poisson, data=epilepsy)
> 
>   x <- model.matrix( ~ Age10 + Base4*Trt, data=epilepsy)
>   poissonMTsetwd(tempdir())   
>   Efit2 <- glmrobMT(x=x, y=epilepsy$Ysum) 
Computing initial estimate
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘poissonL2T-savedvalues.R’
  Running ‘poissonL2T.R’
  Running ‘poissonMT-savedvalues.R’
  Running ‘poissonMT.R’ [6s/20s]
  Running ‘poissonMTinitial-savedvalues.R’
  Running ‘poissonMTinitial.R’ [5s/15s]
  Running ‘poissonMTinitialParallel-savedvalues.R’ [0s/18s]
  Running ‘poissonMTinitialParallel.R’ [6s/16s]
 [20s/88s] OK
* checking PDF version of manual ... [10s/31s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/gannet/ripley/R/packages/tests-flang2/poissonMT.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 5:18.28, 68.11 + 10.47