* using log directory ‘/data/gannet/ripley/R/packages/tests-flang2/bain.Rcheck’
* using R Under development (unstable) (2023-07-22 r84729)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    clang version 17.0.0 (https://github.com/llvm/llvm-project.git b69d4a4fb707e1623a694d4a2c8fdfa1d8d69a06)
    flang-new version 17.0.0 (https://github.com/llvm/llvm-project.git b69d4a4fb707e1623a694d4a2c8fdfa1d8d69a06)
* running under: Fedora Linux 36 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘bain/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘bain’ version ‘0.2.8’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘bain’ can be installed ... [12s/41s] OK
* used C compiler: ‘clang version 17.0.0 (https://github.com/llvm/llvm-project.git 78d91df452d669570e120cb5c3d5febf7f17475d)’
* used Fortran compiler: ‘flang-new version 17.0.0 (https://github.com/llvm/llvm-project.git 78d91df452d669570e120cb5c3d5febf7f17475d)’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [20s/70s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’ [8m/21m]
 [8m/21m] ERROR
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > rm(list=ls())
  > library(testthat)
  > library(lavaan)
  This is lavaan 0.6-16
  lavaan is FREE software! Please report any bugs.
  > library(bain)
  > test_check("bain")
  [ FAIL 5 | WARN 0 | SKIP 0 | PASS 851 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-complement.R:76:20'): PMPc ───────────────────────────────────
  results2$fit$Fit[3] not equal to results3$fit$Fit[4].
  1/1 mismatches
  [1] 0.602 - 0.611 == -0.00903
  ── Failure ('test-complement.R:136:18'): fc ────────────────────────────────────
  c(results2$fit$Fit[4], results2$fit$Com[4]) not equal to c(...).
  1/2 mismatches
  [1] 0.00388 - 0.0115 == -0.00764
  ── Failure ('test-complement.R:616:20'): PMPc ──────────────────────────────────
  c(results2$fit$Fit[7], results2$fit$Com[7]) not equal to c(...).
  1/2 mismatches
  [1] 0.00335 - 0.0712 == -0.0679
  ── Failure ('test-complement.R:747:18'): fc ────────────────────────────────────
  c(results2$fit$Fit[4], results2$fit$Com[4]) not equal to c(1 - results2$fit$Fit[2], 1 - results2$fit$Com[2]).
  1/2 mismatches
  [1] 0.745 - 0.762 == -0.0172
  ── Failure ('test-complement.R:776:18'): fc ────────────────────────────────────
  c(results2$fit$Fit[5], results2$fit$Com[5]) not equal to c(...).
  1/2 mismatches
  [1] 0.373 - 0.366 == 0.00758
  
  [ FAIL 5 | WARN 0 | SKIP 0 | PASS 851 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking re-building of vignette outputs ... [5s/29s] OK
* checking PDF version of manual ... [8s/25s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/gannet/ripley/R/packages/tests-flang2/bain.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 26:11.90, 527.68 + 12.96